C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: keratin 38
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000246646 KRT38-001 ENSG00000171360 9606 - 17:41436446-41440921 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENST00000246646
Transcript ID Testis
ENST00000246646 0.054±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00056U CIL_00056U_000A CGP 17:41420753-41440921
CIL_00056U CIL_00056U_000H CGP 17:41436446-41467429

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005882 IEA intermediate filament
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000103127 Krt35-001 protein_coding Mus_musculus 0 490
ENSMUST00000007318 Krt31-001 protein_coding Mus_musculus 0 481
ENSMUST00000056362 Krt34-001 protein_coding Mus_musculus 0 475
ENSMUST00000073890 Krt33b-001 protein_coding Mus_musculus 0 453
ENSMUST00000018399 Krt33a-001 protein_coding Mus_musculus 0 453
ENSMUST00000107416 Krt36-001 protein_coding Mus_musculus 0 422
ENSMUST00000173988 Krt35-002 retained_intron Mus_musculus 0 329
ENSMUST00000074253 Krt40-001 protein_coding Mus_musculus 0 270
ENSMUST00000107443 Krt40-002 protein_coding Mus_musculus 2e-18 99

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