C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: keratin 222
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000103132 Krt222-001 ENSMUSG00000035849 10090 - 11:99232761-99244067 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000103132
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000103132 0.197±0.09 0.159±0.06 0.123±0.06 1.926±1.48 0.161±0.09 0.114±0.02 3.416±0.30 0.235±0.10 0.032±0.02 0.166±0.01 0.479±0.22 0.141±0.06 0.035±0.01 0.038±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004QH CIL_0004QH_0002 CGP 11:99209047-99244085
CIL_0000TP CIL_0000TP_0003 CGP 11:99232761-99285262

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005882 IEA intermediate filament
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000394049 KRT222-002 nonsense_mediated_decay Homo_sapiens 0 839
ENST00000394052 KRT222-001 protein_coding Homo_sapiens 0 1016
ENST00000476049 KRT222-001 nonsense_mediated_decay Homo_sapiens 0 1016
ENST00000580719 KRT222-004 nonsense_mediated_decay Homo_sapiens 4.06377e-44 182
ENST00000581564 KRT222-003 nonsense_mediated_decay Homo_sapiens 0 466

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