C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proteasome (prosome, macropain) subunit, beta type 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000103147 Psmb3-001 ENSMUSG00000069744 10090 + 11:97703399-97713500 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000103147
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000103147 147.835±4.59 153.798±5.20 143.939±8.29 139.296±93.47 145.554±14.74 120.786±11.57 96.175±15.73 163.876±2.32 167.314±44.45 112.251±1.99 97.892±2.96 148.904±34.43 124.220±62.70 38.262±16.63

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005QW CIL_0005QW_0002 CGP 11:97688823-97713500
CIL_0000SI CIL_0000SI_0002 CGP 11:97703399-97744704

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004175 ISO endopeptidase activity
GO:0004298 IEA threonine-type endopeptidase activity
GO:0005634 IEA nucleus
GO:0005829 TAS cytosol
GO:0005839 IDA proteasome core complex
GO:0030163 TAS protein catabolic process
GO:0051603 IEA proteolysis involved in cellular protein catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000457237 PSMB3P2-001 processed_pseudogene Homo_sapiens 0 665
ENST00000610434 PSMB3-006 protein_coding Homo_sapiens 0 614
ENST00000613870 PSMB3-002 nonsense_mediated_decay Homo_sapiens 0 457
ENST00000619426 PSMB3-001 protein_coding Homo_sapiens 0 872
ENST00000619951 PSMB3-201 protein_coding Homo_sapiens 0 872
ENST00000620309 PSMB3-003 nonsense_mediated_decay Homo_sapiens 0 455

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