C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0005QW_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000277258-ENSG00000277791 CGP 9606 17:38733897-38764231
GeneTranscriptPositionBiotype
ENSG00000274607 (U6)
U6 spliceosomal RNA
ENST00000613402 (U6.1-250) 38755279-38755400 snRNA
ENSG00000277791 (PSMB3)
proteasome (prosome, macropain) subunit, beta type, 3
ENST00000610434 (PSMB3-006) 38752747-38760580 protein_coding
ENST00000613870 (PSMB3-002) 38752764-38764225 nonsense_mediated_decay
ENST00000614132 (PSMB3-005) 38760385-38764225 retained_intron
ENST00000618159 (PSMB3-004) 38762051-38764225 retained_intron
ENST00000619426 (PSMB3-001) 38752736-38764231 protein_coding
ENST00000620309 (PSMB3-003) 38752773-38764225 nonsense_mediated_decay
ENSG00000277972 (CISD3)
CDGSH iron sulfur domain 3
ENST00000613478 (CISD3-002) 38730235-38735021 protein_coding
ENST00000616128 (CISD3-003) 38731107-38733715 retained_intron
ENST00000619858 (CISD3-001) 38730359-38735044 processed_transcript
CIL_0005QW_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000018537-ENSMUSG00000069744 CGP 10090 11:97688823-97713500
GeneTranscriptPositionBiotype
ENSMUSG00000018537 (Pcgf2)
polycomb group ring finger 2
ENSMUST00000018681 (Pcgf2-001) 97689820-97700497 protein_coding
ENSMUST00000103148 (Pcgf2-002) 97689820-97699641 protein_coding
ENSMUST00000103149 (Pcgf2-005) 97689792-97692407 protein_coding
ENSMUST00000126185 (Pcgf2-003) 97697199-97699581 processed_transcript
ENSMUST00000134003 (Pcgf2-004) 97690528-97692409 processed_transcript
ENSMUST00000169807 (Pcgf2-201) 97688823-97699648 protein_coding
ENSMUST00000179765 (Pcgf2-202) 97688823-97699384 protein_coding
ENSMUSG00000069744 (Psmb3)
proteasome (prosome, macropain) subunit, beta type 3
ENSMUST00000103147 (Psmb3-001) 97703399-97713500 protein_coding
ENSMUST00000129197 (Psmb3-003) 97712062-97713500 retained_intron
ENSMUST00000138265 (Psmb3-002) 97703434-97708064 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005QW_0001ENSG00000274607ENST00000613402ENSG00000277791ENST00000610434ENST00000613870ENST00000614132ENST00000618159ENST00000619426ENST00000620309ENSG00000277972ENST00000613478ENST00000616128ENST00000619858CIL_0005QW_0002ENSMUSG00000018537ENSMUST00000018681ENSMUST00000103148ENSMUST00000103149ENSMUST00000126185ENSMUST00000134003ENSMUST00000169807ENSMUST00000179765ENSMUSG00000069744ENSMUST00000103147ENSMUST00000129197ENSMUST00000138265
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005QW_0001ENSG00000274607ENST00000613402ENSG00000277791ENST00000610434ENST00000613870ENST00000614132ENST00000619426ENST00000620309ENSG00000277972ENST00000613478ENST00000616128ENST00000619858CIL_0005QW_0002ENSMUSG00000018537ENSMUST00000018681ENSMUST00000103148ENSMUST00000103149ENSMUST00000134003ENSMUST00000169807ENSMUST00000179765ENSMUSG00000069744ENSMUST00000103147ENSMUST00000138265
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000274607 ENST00000613402 N/A 0.612±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000277791 ENST00000610434 23.384±0.00 30.064±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000613870 N/A N/A N/A N/A 1.468±0.00 N/A 6.782±0.00 N/A N/A N/A 7.838±0.00 7.679±0.00 N/A N/A
ENST00000614132 N/A N/A N/A N/A N/A N/A 13.297±0.00 N/A 43.400±0.00 30.663±0.00 N/A N/A N/A N/A
ENST00000618159 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000619426 56.476±0.00 100.693±0.00 1.757±0.00 37.750±17.16 34.604±32.32 29.841±22.36 25.813±14.42 58.285±36.43 43.176±33.80 49.818±35.75 64.361±53.26 74.347±32.83 116.562±48.72 44.000±20.39
ENST00000620309 N/A N/A N/A N/A 4.201±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000277972 ENST00000613478 N/A N/A N/A 0.830±0.00 0.281±0.00 N/A 0.526±0.00 1.975±0.00 N/A N/A N/A N/A N/A N/A
ENST00000616128 19.482±0.00 21.789±0.00 N/A 13.366±0.00 30.341±0.00 27.531±0.00 7.507±6.75 18.465±14.65 18.199±16.56 9.340±7.82 2.787±0.00 30.115±1.03 17.635±7.63 10.930±5.27
ENST00000619858 N/A N/A N/A N/A N/A N/A N/A N/A 2.444±2.13 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000018537 ENSMUST00000018681 N/A 2.602±0.00 N/A N/A 2.050±0.00 3.295±0.68 N/A N/A 0.203±0.00 N/A N/A N/A N/A N/A
ENSMUST00000103148 5.368±2.32 N/A 12.794±1.40 28.907±11.64 4.350±1.97 5.430±0.45 2.460±1.31 6.740±1.52 2.601±1.46 5.521±1.99 0.427±0.12 10.576±6.00 6.499±2.10 1.272±0.52
ENSMUST00000103149 N/A 18.576±3.41 N/A N/A 15.059±4.75 27.032±8.96 N/A 6.805±2.19 1.591±0.56 10.792±4.91 N/A 26.119±9.83 8.418±0.00 1.172±0.00
ENSMUST00000126185 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134003 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.402±0.00 N/A N/A N/A
ENSMUST00000169807 2.825±1.56 3.170±0.54 7.386±0.45 15.492±4.95 2.952±1.13 5.101±0.78 1.001±0.20 4.066±0.52 1.109±0.89 3.752±1.50 0.304±0.15 6.508±1.72 1.765±0.96 0.613±0.00
ENSMUST00000179765 N/A 2.872±0.00 1.868±0.00 N/A N/A N/A 0.425±0.21 N/A N/A 2.535±0.00 N/A N/A N/A N/A
ENSMUSG00000069744 ENSMUST00000103147 147.835±4.59 153.798±5.20 143.939±8.29 139.296±93.47 145.554±14.74 120.786±11.57 96.175±15.73 163.876±2.32 167.314±44.45 112.251±1.99 97.892±2.96 148.904±34.43 124.220±62.70 38.262±16.63
ENSMUST00000129197 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138265 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.117±0.00

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