C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000519856 RP11-697N18.3-001 ENSG00000253330 9606 - 8:47511034-47512141 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000519856
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000519856 0.175±0.00 0.463±0.00 0.148±0.00 0.299±0.19 0.152±0.00 0.259±0.00 0.264±0.00 0.437±0.33 0.320±0.00 0.720±0.61 0.371±0.00 0.539±0.30 0.867±0.25 0.226±0.05

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000028949 Nsfl1c-002 protein_coding Mus_musculus 0 1171
ENSMUST00000089140 Nsfl1c-001 protein_coding Mus_musculus 0 1155
ENSMUST00000120352 Gm5555-001 processed_pseudogene Mus_musculus 0 1033
ENSMUST00000146695 Nsfl1c-005 retained_intron Mus_musculus 0 813
ENSMUST00000153333 Nsfl1c-004 retained_intron Mus_musculus 0 800
ENSMUST00000133197 Nsfl1c-007 retained_intron Mus_musculus 0 508
ENSMUST00000103160 Nsfl1c-003 protein_coding Mus_musculus 0 508
ENSMUST00000156182 Nsfl1c-008 processed_transcript Mus_musculus 0 270

Loading