C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein kinase C, zeta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000103178 Prkcz-002 ENSMUSG00000029053 10090 - 4:155260129-155345772 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainColonHeartLiverMuscleOvaryPlacentaENSMUST00000103178
Transcript ID Adipose Adrenal Bladder Brain Colon Heart Liver Muscle Ovary Placenta
ENSMUST00000103178 0.576±0.24 0.361±0.00 0.555±0.00 17.028±3.28 7.076±0.00 0.162±0.00 0.135±0.00 0.077±0.02 0.723±0.00 2.289±0.33

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007QV CIL_0007QV_0002 VISTA 4:154934679-155536167

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000226 IMP microtubule cytoskeleton organization
GO:0004672 IDA protein kinase activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005635 IDA nuclear envelope
GO:0005737 IDA cytoplasm
GO:0005815 IGI microtubule organizing center
GO:0005886 IDA plasma membrane
GO:0005923 IDA tight junction
GO:0005938 IDA cell cortex
GO:0006468 IDA protein phosphorylation
GO:0008270 IEA zinc ion binding
GO:0016324 IDA apical plasma membrane
GO:0016363 IDA nuclear matrix
GO:0043203 IDA axon hillock
GO:0043234 IDA protein complex
GO:0045179 IDA apical cortex
GO:0072659 IMP protein localization to plasma membrane
GO:1990138 IGI neuron projection extension

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000063592 prkcz-001 protein_coding Danio_rerio 0 828
ENST00000378567 PRKCZ-001 protein_coding Homo_sapiens 0 1938
ENST00000392722 RP3-514P16.1-001 processed_pseudogene Homo_sapiens 0 283
ENST00000400920 PRKCZ-201 protein_coding Homo_sapiens 0 1936
ENST00000400921 PRKCZ-009 protein_coding Homo_sapiens 0 2028
ENST00000419838 PRKCZ-027 processed_transcript Homo_sapiens 0 327
ENST00000461106 PRKCZ-015 protein_coding Homo_sapiens 0 1893
ENST00000461465 PRKCZ-016 protein_coding Homo_sapiens 0 525
ENST00000466352 PRKCZ-006 protein_coding Homo_sapiens 0 414
ENST00000466651 PRKCZ-014 processed_transcript Homo_sapiens 2e-31 139
ENST00000468310 PRKCZ-007 protein_coding Homo_sapiens 0 424
ENST00000470511 PRKCZ-021 protein_coding Homo_sapiens 0 599
ENST00000470596 PRKCZ-017 protein_coding Homo_sapiens 0 664
ENST00000470986 PRKCZ-010 protein_coding Homo_sapiens 0 688
ENST00000471018 PRKCZ-004 protein_coding Homo_sapiens 0 460
ENST00000472017 PRKCZ-023 processed_transcript Homo_sapiens 0 350
ENST00000478770 PRKCZ-012 nonsense_mediated_decay Homo_sapiens 0 1247
ENST00000479263 PRKCZ-002 processed_transcript Homo_sapiens 0 1615
ENST00000481140 PRKCZ-019 nonsense_mediated_decay Homo_sapiens 0 649
ENST00000482686 PRKCZ-003 protein_coding Homo_sapiens 0 566
ENST00000486681 PRKCZ-022 protein_coding Homo_sapiens 0 492
ENST00000495347 PRKCZ-020 protein_coding Homo_sapiens 0 409
ENST00000496325 PRKCZ-018 protein_coding Homo_sapiens 0 558
ENST00000497183 PRKCZ-011 protein_coding Homo_sapiens 0 368
ENST00000503672 PRKCZ-024 retained_intron Homo_sapiens 0 496
ENST00000505322 PRKCZ-025 retained_intron Homo_sapiens 0 1125

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