C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 50A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000105863 Tmem50a-002 ENSMUSG00000028822 10090 - 4:134898391-134915015 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000105863
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000105863 20.465±2.76 95.272±8.04 37.553±0.00 36.590±6.68 17.629±2.44 11.267±1.96 13.978±2.04 13.540±1.46 28.510±4.99 42.261±6.60 24.490±3.28 2.761±0.43

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001WX CIL_0001WX_0002 CGP 4:134864536-134915024

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IDA cytoplasm
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000374358 TMEM50A-001 protein_coding Homo_sapiens 0 503
ENST00000468704 TMEM50A-005 processed_transcript Homo_sapiens 0 446
ENST00000480937 TMEM50A-004 processed_transcript Homo_sapiens 3e-33 147
ENST00000491936 TMEM50A-003 processed_transcript Homo_sapiens 0 303
ENST00000498135 TMEM50A-002 processed_transcript Homo_sapiens 0 303

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