C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 50A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000374358 TMEM50A-001 ENSG00000183726 9606 + 1:25337917-25362361 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000374358
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000374358 13.305±0.00 28.797±0.00 5.597±0.00 12.564±0.00 11.116±3.70 12.234±1.57 2.133±0.00 4.817±0.00 5.807±0.00 10.118±0.00 15.368±5.31 10.805±2.19 6.709±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001WX CIL_0001WX_0001 CGP 1:25272393-25362361
CIL_0003Q3 CIL_0003Q3_0002 CGP 1:25337917-25430192

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0005783 IDA endoplasmic reticulum
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000030626 Tmem50a-001 protein_coding Mus_musculus 0 575
ENSMUST00000105863 Tmem50a-002 protein_coding Mus_musculus 0 503

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