C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sirtuin 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000106048 Sirt3-002 ENSMUSG00000025486 10090 - 7:140863670-140881869 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastHeartKidneyLiverMuscleOvaryTestisENSMUST00000106048
Transcript ID Adrenal Bladder Brain Breast Heart Kidney Liver Muscle Ovary Testis
ENSMUST00000106048 25.254±2.35 19.529±0.00 34.429±0.00 17.495±3.49 30.122±0.92 47.654±12.35 54.435±14.12 25.065±0.18 22.730±2.89 21.428±1.77

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006LA CIL_0006LA_0002 CGP 7:140856957-140882309
CIL_0006QN CIL_0006QN_0002 CGP 7:140863670-140898643

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0005739 IDA:ISS mitochondrion
GO:0006476 IDA:ISS protein deacetylation
GO:0008270 ISS zinc ion binding
GO:0009060 ISS aerobic respiration
GO:0016020 IDA membrane
GO:0032041 IDA NAD-dependent histone deacetylase activity (H3-K14 specific)
GO:0034983 ISS peptidyl-lysine deacetylation
GO:0070403 IEA NAD+ binding
GO:0070932 IDA histone H3 deacetylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000382743 SIRT3-001 protein_coding Homo_sapiens 0 865
ENST00000524564 SIRT3-002 protein_coding Homo_sapiens 0 654
ENST00000525237 SIRT3-010 protein_coding Homo_sapiens 2.94273e-44 182
ENST00000525319 SIRT3-003 protein_coding Homo_sapiens 0 811
ENST00000525776 SIRT3-011 protein_coding Homo_sapiens 0 217
ENST00000526854 SIRT3-016 nonsense_mediated_decay Homo_sapiens 0 566
ENST00000528469 SIRT3-009 protein_coding Homo_sapiens 0 446
ENST00000528702 SIRT3-007 processed_transcript Homo_sapiens 0 521
ENST00000529055 SIRT3-015 nonsense_mediated_decay Homo_sapiens 0 446
ENST00000529382 SIRT3-008 protein_coding Homo_sapiens 0 863
ENST00000530067 SIRT3-014 nonsense_mediated_decay Homo_sapiens 0 446
ENST00000531753 SIRT3-012 processed_transcript Homo_sapiens 0 446
ENST00000532837 SIRT3-005 nonsense_mediated_decay Homo_sapiens 0 861
ENST00000532956 SIRT3-004 protein_coding Homo_sapiens 0 523

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