C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006QN_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000142082-ENSG00000185627 CGP 9606 11:215458-252984
GeneTranscriptPositionBiotype
ENSG00000142082 (SIRT3)
sirtuin 3 		ENST00000382743 (SIRT3-001) 215458-236431 protein_coding
ENST00000524564 (SIRT3-002) 216391-236354 protein_coding
ENST00000525237 (SIRT3-010) 233209-236326 protein_coding
ENST00000525319 (SIRT3-003) 216206-236354 protein_coding
ENST00000525776 (SIRT3-011) 233192-233683 protein_coding
ENST00000526854 (SIRT3-016) 224167-236330 nonsense_mediated_decay
ENST00000528469 (SIRT3-009) 232983-236859 protein_coding
ENST00000528702 (SIRT3-007) 225673-236931 processed_transcript
ENST00000529055 (SIRT3-015) 224222-236339 nonsense_mediated_decay
ENST00000529382 (SIRT3-008) 216611-236834 protein_coding
ENST00000529937 (SIRT3-006) 216145-236337 nonsense_mediated_decay
ENST00000530067 (SIRT3-014) 230603-236345 nonsense_mediated_decay
ENST00000531753 (SIRT3-012) 224090-233928 processed_transcript
ENST00000532837 (SIRT3-005) 216179-236343 nonsense_mediated_decay
ENST00000532956 (SIRT3-004) 216525-236352 protein_coding
ENST00000534381 (SIRT3-013) 225762-230692 retained_intron
ENSG00000185627 (PSMD13)
proteasome (prosome, macropain) 26S subunit, non-ATPase, 13 		ENST00000352303 (PSMD13-007) 237026-252953 protein_coding
ENST00000382671 (PSMD13-002) 237038-252981 nonsense_mediated_decay
ENST00000431206 (PSMD13-003) 236977-252981 protein_coding
ENST00000525665 (PSMD13-004) 237000-252966 nonsense_mediated_decay
ENST00000526783 (PSMD13-011) 244429-252827 protein_coding
ENST00000527047 (PSMD13-005) 237004-248197 retained_intron
ENST00000527982 (PSMD13-014) 250784-252983 retained_intron
ENST00000528906 (PSMD13-009) 236981-251611 protein_coding
ENST00000529372 (PSMD13-006) 236966-248791 nonsense_mediated_decay
ENST00000529679 (PSMD13-013) 251543-252617 retained_intron
ENST00000532025 (PSMD13-012) 251227-252845 processed_transcript
ENST00000532097 (PSMD13-001) 236546-252956 protein_coding
ENST00000533717 (PSMD13-010) 248607-251894 retained_intron
ENST00000534590 (PSMD13-008) 236977-247300 retained_intron
ENST00000621534 (PSMD13-201) 236996-252984 protein_coding
ENSG00000277290 (RP11-326C3.16)
 ENST00000620253 (RP11-326C3.16-001) 243099-243483 processed_pseudogene
CIL_0006QN_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025486-ENSMUSG00000025487 CGP 10090 7:140863670-140898643
GeneTranscriptPositionBiotype
ENSMUSG00000025485 (Ric8)
resistance to inhibitors of cholinesterase 8 homolog (C. elegans) 		ENSMUST00000026558 (Ric8-001) 140856957-140863730 protein_coding
ENSMUST00000123925 (Ric8-002) 140857699-140862959 retained_intron
ENSMUST00000131850 (Ric8-003) 140860642-140863143 retained_intron
ENSMUST00000139956 (Ric8-006) 140857442-140858542 processed_transcript
ENSMUST00000147815 (Ric8-007) 140858162-140859734 processed_transcript
ENSMUST00000151384 (Ric8-004) 140857315-140858342 retained_intron
ENSMUST00000152212 (Ric8-008) 140861173-140862619 retained_intron
ENSMUST00000153498 (Ric8-005) 140857422-140858558 processed_transcript
ENSMUSG00000025486 (Sirt3)
sirtuin 3 		ENSMUST00000026559 (Sirt3-001) 140863670-140882309 protein_coding
ENSMUST00000106048 (Sirt3-002) 140863670-140881869 protein_coding
ENSMUST00000137024 (Sirt3-005) 140865020-140878147 protein_coding
ENSMUST00000137710 (Sirt3-003) 140876434-140881869 protein_coding
ENSMUST00000147331 (Sirt3-004) 140869489-140881869 protein_coding
ENSMUSG00000025487 (Psmd13)
proteasome (prosome, macropain) 26S subunit, non-ATPase, 13 		ENSMUST00000026560 (Psmd13-001) 140881968-140898642 protein_coding
ENSMUST00000124736 (Psmd13-004) 140882438-140886863 processed_transcript
ENSMUST00000125668 (Psmd13-008) 140890389-140897840 retained_intron
ENSMUST00000129683 (Psmd13-005) 140882452-140889719 processed_transcript
ENSMUST00000130462 (Psmd13-009) 140889400-140898395 protein_coding
ENSMUST00000140411 (Psmd13-003) 140882429-140887265 processed_transcript
ENSMUST00000146875 (Psmd13-006) 140882467-140887178 retained_intron
ENSMUST00000151644 (Psmd13-002) 140882414-140897912 retained_intron
ENSMUST00000153385 (Psmd13-007) 140883500-140886431 processed_transcript
ENSMUST00000163610 (Psmd13-011) 140882472-140898288 protein_coding
ENSMUST00000164681 (Psmd13-013) 140882472-140898233 protein_coding
ENSMUST00000165539 (Psmd13-012) 140894515-140898643 protein_coding
ENSMUST00000166889 (Psmd13-010) 140882472-140898288 nonsense_mediated_decay
ENSMUSG00000083396 (Gm15542)
predicted gene 15542 		ENSMUST00000121585 (Gm15542-001) 140890887-140892080 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006QN_0001ENSG00000142082ENST00000382743ENST00000525319ENSG00000185627ENST00000352303ENST00000382671ENST00000525665ENST00000526783ENST00000528906ENST00000529679ENST00000532025ENST00000532097ENST00000533717ENST00000621534ENSG00000277290ENST00000620253CIL_0006QN_0002ENSMUSG00000025485ENSMUST00000026558ENSMUST00000123925ENSMUST00000131850ENSMUST00000139956ENSMUST00000153498ENSMUSG00000025486ENSMUST00000026559ENSMUST00000106048ENSMUST00000147331ENSMUSG00000025487ENSMUST00000026560ENSMUST00000163610ENSMUST00000165539ENSMUST00000166889ENSMUSG00000083396ENSMUST00000121585
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000142082 ENST00000382743 N/A N/A N/A 11.544±0.00 N/A 1.272±0.00 6.230±0.00 8.978±0.00 N/A N/A N/A 10.319±1.34 N/A N/A
ENST00000524564 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000525237 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000525319 N/A N/A N/A N/A N/A N/A 9.862±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000525776 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526854 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528469 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528702 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529055 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529382 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529937 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530067 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531753 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532837 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532956 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534381 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000185627 ENST00000352303 N/A N/A 2.631±0.00 13.503±9.42 12.186±9.19 8.211±5.83 6.054±4.23 11.736±4.65 8.119±5.85 12.367±8.81 16.231±14.76 20.161±14.42 13.676±0.00 20.399±0.00
ENST00000382671 27.420±0.00 51.889±0.00 N/A 4.096±0.00 32.782±0.00 9.814±0.00 7.752±5.86 14.726±9.34 11.221±8.06 21.041±0.00 14.681±9.47 22.778±12.84 46.875±14.71 20.759±0.69
ENST00000431206 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000525665 N/A N/A 2.674±0.00 N/A N/A 3.415±0.00 N/A N/A N/A N/A 1.578±0.00 13.803±0.00 N/A N/A
ENST00000526783 28.236±0.00 51.802±0.00 N/A 26.880±0.00 N/A N/A N/A 17.221±0.00 N/A N/A N/A 63.008±0.00 54.194±0.00 29.652±0.66
ENST00000527047 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527982 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528906 N/A N/A N/A N/A N/A N/A 1.924±0.00 N/A 3.288±0.00 N/A N/A N/A N/A N/A
ENST00000529372 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529679 N/A N/A N/A N/A N/A 6.464±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532025 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 49.590±0.00 33.530±0.00
ENST00000532097 N/A N/A N/A 2.299±0.00 N/A N/A N/A N/A N/A N/A N/A 12.141±0.00 N/A 13.755±0.00
ENST00000533717 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 34.006±0.00
ENST00000534590 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000621534 12.669±0.00 N/A N/A N/A 3.035±0.00 15.382±0.00 9.034±0.00 N/A 7.795±6.52 9.534±7.90 32.995±0.00 13.781±0.00 20.496±9.48 14.118±0.00
ENSG00000277290 ENST00000620253 0.675±0.00 1.876±0.00 0.913±0.00 0.388±0.24 0.826±0.57 0.309±0.00 0.196±0.00 0.677±0.07 1.142±0.85 0.543±0.03 0.144±0.00 1.254±0.63 0.146±0.06 0.532±0.01
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025485 ENSMUST00000026558 15.710±0.73 12.300±2.04 9.633±0.11 12.488±3.43 12.382±3.01 17.482±5.44 6.678±0.26 9.496±1.66 9.326±1.13 17.890±1.49 N/A 13.337±2.57 8.449±1.14 N/A
ENSMUST00000123925 18.837±3.13 N/A 16.924±0.31 20.676±2.32 11.496±0.64 15.508±3.35 9.246±0.00 N/A N/A 15.064±2.05 N/A 13.839±1.63 16.348±3.21 N/A
ENSMUST00000131850 N/A N/A N/A N/A 7.163±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139956 N/A 32.690±0.51 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147815 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151384 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152212 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153498 N/A 28.682±2.70 N/A N/A 34.142±5.58 33.734±0.79 N/A N/A N/A 31.468±2.70 N/A 34.295±3.33 N/A N/A
ENSMUSG00000025486 ENSMUST00000026559 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 21.100±2.68
ENSMUST00000106048 N/A 25.254±2.35 19.529±0.00 34.429±0.00 17.495±3.49 N/A 30.122±0.92 47.654±12.35 54.435±14.12 N/A 25.065±0.18 22.730±2.89 N/A 21.428±1.77
ENSMUST00000137024 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137710 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147331 N/A N/A N/A N/A N/A N/A N/A N/A 38.005±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000025487 ENSMUST00000026560 40.044±3.33 25.898±2.43 31.056±0.56 43.714±0.24 25.822±7.54 40.111±6.40 28.171±3.20 36.238±2.26 41.441±13.23 31.029±2.38 32.724±6.18 32.419±7.68 31.141±15.48 41.703±7.23
ENSMUST00000124736 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000125668 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129683 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130462 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140411 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146875 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151644 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153385 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000163610 N/A N/A N/A 49.459±0.00 N/A N/A N/A N/A N/A N/A N/A 52.064±0.00 63.903±14.62 33.823±0.00
ENSMUST00000164681 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000165539 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 232.742±0.00
ENSMUST00000166889 N/A N/A N/A N/A 19.668±0.00 N/A N/A N/A 31.615±0.00 N/A 25.375±1.99 30.502±0.97 35.465±11.38 N/A
ENSMUSG00000083396 ENSMUST00000121585 0.109±0.02 N/A 0.147±0.07 2.260±2.84 0.115±0.01 0.133±0.00 0.062±0.03 0.115±0.04 0.369±0.32 0.145±0.09 0.169±0.07 0.288±0.11 0.154±0.06 0.231±0.12

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