C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: HGF-regulated tyrosine kinase substrate
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000106203 Hgs-002 ENSMUSG00000025793 10090 + 11:120467635-120483979 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003BA CIL_0003BA_0002 CGP 11:120464866-120483984
CIL_0004BU CIL_0004BU_0002 CGP 11:120467635-120489065

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IDA cytoplasm
GO:0006886 IEA intracellular protein transport
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000019661 hgs-201 protein_coding Danio_rerio 0 680
ENSDART00000131913 hgs-001 protein_coding Danio_rerio 0 680
ENSDART00000056622 hgs-202 protein_coding Danio_rerio 0 514
ENST00000329138 HGS-001 protein_coding Homo_sapiens 0 2663
ENST00000571237 HGS-013 protein_coding Homo_sapiens 0 621
ENST00000571518 HGS-003 protein_coding Homo_sapiens 0 444
ENST00000572392 HGS-008 protein_coding Homo_sapiens 0 603
ENST00000573080 HGS-007 retained_intron Homo_sapiens 1.99965e-42 178
ENST00000576087 HGS-010 retained_intron Homo_sapiens 0 496
ENST00000576393 HGS-009 retained_intron Homo_sapiens 0 662
ENST00000576498 HGS-004 retained_intron Homo_sapiens 0 911
ENST00000577012 HGS-011 protein_coding Homo_sapiens 0 496

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