C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: hepatocyte growth factor-regulated tyrosine kinase substrate
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000572392 HGS-008 ENSG00000185359 9606 + 17:81684033-81693750 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainColonHeartLiverMuscleTestisENST00000572392
Transcript ID Adipose Adrenal Bladder Brain Colon Heart Liver Muscle Testis
ENST00000572392 14.392±0.00 19.472±0.00 5.766±0.00 5.492±0.00 6.517±0.00 7.674±0.00 4.244±0.00 27.537±0.00 27.013±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002FQ CIL_0002FQ_0001 CGP 17:81666364-81683924
CIL_0003BA CIL_0003BA_0001 CGP 17:81681174-81703138
CIL_0004BU CIL_0004BU_0001 CGP 17:81683326-81707526

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IDA cytoplasm
GO:0006886 IEA intracellular protein transport
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000140862 Hgs-004 protein_coding Mus_musculus 0 948
ENSMUST00000026900 Hgs-201 protein_coding Mus_musculus 0 603
ENSMUST00000106203 Hgs-002 protein_coding Mus_musculus 0 603
ENSMUST00000106205 Hgs-001 protein_coding Mus_musculus 0 603
ENSMUST00000141826 Hgs-003 processed_transcript Mus_musculus 0 412

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