C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004BU_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000185359-ENSG00000262814 CGP 9606 17:81683326-81707526
GeneTranscriptPositionBiotype
ENSG00000185359 (HGS)
hepatocyte growth factor-regulated tyrosine kinase substrate 		ENST00000329138 (HGS-001) 81683932-81702119 protein_coding
ENST00000570355 (HGS-016) 81696601-81701127 retained_intron
ENST00000570652 (HGS-019) 81701127-81703138 nonsense_mediated_decay
ENST00000571237 (HGS-013) 81693870-81696987 protein_coding
ENST00000571518 (HGS-003) 81683326-81688790 protein_coding
ENST00000571647 (HGS-002) 81695956-81698356 retained_intron
ENST00000571885 (HGS-014) 81695681-81696383 retained_intron
ENST00000572392 (HGS-008) 81684033-81693750 protein_coding
ENST00000573080 (HGS-007) 81691206-81693014 retained_intron
ENST00000573320 (HGS-018) 81700792-81701974 protein_coding
ENST00000573949 (HGS-015) 81696186-81702115 retained_intron
ENST00000575058 (HGS-012) 81693675-81695930 retained_intron
ENST00000575078 (HGS-017) 81700583-81701348 protein_coding
ENST00000576087 (HGS-010) 81686267-81690830 retained_intron
ENST00000576393 (HGS-009) 81683983-81690604 retained_intron
ENST00000576498 (HGS-004) 81683984-81691830 retained_intron
ENST00000577012 (HGS-011) 81684108-81688827 protein_coding
ENSG00000214087 (ARL16)
ADP-ribosylation factor-like 16 		ENST00000397498 (ARL16-001) 81681174-81683924 protein_coding
ENST00000570561 (ARL16-008) 81681466-81683659 protein_coding
ENST00000570910 (ARL16-002) 81681222-81683738 retained_intron
ENST00000571082 (ARL16-003) 81681220-81683743 retained_intron
ENST00000572704 (ARL16-013) 81682665-81683625 retained_intron
ENST00000572937 (ARL16-011) 81682685-81683687 retained_intron
ENST00000573392 (ARL16-010) 81681201-81683666 protein_coding
ENST00000573569 (ARL16-012) 81681523-81683734 retained_intron
ENST00000573715 (ARL16-005) 81681608-81683668 protein_coding
ENST00000574938 (ARL16-007) 81681369-81683659 protein_coding
ENST00000576135 (ARL16-009) 81681492-81683668 protein_coding
ENST00000576914 (ARL16-006) 81681795-81683126 nonsense_mediated_decay
ENST00000577142 (ARL16-004) 81681187-81683781 retained_intron
ENST00000621051 (ARL16-201) 81681220-81683924 protein_coding
ENST00000622299 (ARL16-014) 81681187-81683763 protein_coding
ENSG00000262049 (RP13-1032I1.7)
 ENST00000575312 (RP13-1032I1.7-001) 81701324-81703300 antisense
ENSG00000262660 (SLC25A10)
39S ribosomal protein L12, mitochondrial {ECO:0000313|Ensembl:ENSP00000439565}; Mitochondrial dicarboxylate carrier {ECO:0000313 		ENST00000571730 (SLC25A10-001) 81703371-81720539 protein_coding
ENSG00000262814 (MRPL12)
mitochondrial ribosomal protein L12 		ENST00000333676 (MRPL12-001) 81703357-81707526 protein_coding
ENST00000541223 (MRPL12-201) 81703370-81707525 protein_coding
ENSG00000277784 (MIR6786)
microRNA 6786 		ENST00000616843 (MIR6786-201) 81693757-81693869 miRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0004BU_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025793-ENSMUSG00000039640 CGP 10090 11:120467635-120489065
GeneTranscriptPositionBiotype
ENSMUSG00000025793 (Hgs)
HGF-regulated tyrosine kinase substrate 		ENSMUST00000026900 (Hgs-201) 120467635-120483984 protein_coding
ENSMUST00000106203 (Hgs-002) 120467635-120483979 protein_coding
ENSMUST00000106205 (Hgs-001) 120467635-120483979 protein_coding
ENSMUST00000135231 (Hgs-005) 120477515-120480187 protein_coding
ENSMUST00000140862 (Hgs-004) 120467635-120477332 protein_coding
ENSMUST00000141826 (Hgs-003) 120467635-120475319 processed_transcript
ENSMUSG00000039640 (Mrpl12)
mitochondrial ribosomal protein L12 		ENSMUST00000043627 (Mrpl12-001) 120484613-120489065 protein_coding
ENSMUST00000137619 (Mrpl12-002) 120485027-120488457 processed_transcript
ENSMUSG00000097658 (Gm16755)
predicted gene, 16755 		ENSMUST00000180595 (Gm16755-201) 120486339-120488582 lincRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004BU_0001ENSG00000185359ENST00000329138ENST00000570355ENST00000570652ENST00000571237ENST00000571518ENST00000571647ENST00000571885ENST00000572392ENST00000573080ENST00000573320ENST00000573949ENST00000575058ENST00000575078ENST00000576087ENST00000576393ENST00000576498ENST00000577012ENSG00000214087ENST00000397498ENST00000570561ENST00000570910ENST00000571082ENST00000572704ENST00000572937ENST00000573392ENST00000573569ENST00000573715ENST00000574938ENST00000576135ENST00000576914ENST00000577142ENST00000621051ENST00000622299ENSG00000262049ENST00000575312ENSG00000262660ENST00000571730ENSG00000262814ENST00000333676ENST00000541223ENSG00000277784ENST00000616843CIL_0004BU_0002ENSMUSG00000025793ENSMUST00000026900ENSMUST00000106203ENSMUST00000106205ENSMUST00000135231ENSMUST00000140862ENSMUST00000141826ENSMUSG00000039640ENSMUST00000043627ENSMUST00000137619ENSMUSG00000097658ENSMUST00000180595
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004BU_0001ENSG00000185359ENST00000329138ENST00000571237ENST00000571518ENST00000572392ENST00000576498ENSG00000214087ENST00000397498ENST00000571082ENST00000573569ENST00000574938ENST00000576135ENST00000622299ENSG00000262049ENST00000575312ENSG00000262660ENST00000571730ENSG00000262814ENST00000333676ENST00000541223ENSG00000277784ENST00000616843CIL_0004BU_0002ENSMUSG00000025793ENSMUST00000026900ENSMUST00000106205ENSMUST00000135231ENSMUST00000141826ENSMUSG00000039640ENSMUST00000043627ENSMUST00000137619ENSMUSG00000097658ENSMUST00000180595
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000185359 ENST00000329138 N/A 8.655±0.00 2.611±0.00 5.751±0.00 1.490±0.00 4.979±0.00 0.565±0.00 0.859±0.00 3.496±0.21 4.439±0.00 10.551±9.31 2.989±0.00 16.341±5.08 14.595±0.00
ENST00000570355 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000570652 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571237 21.686±0.00 29.581±0.00 N/A N/A N/A 20.768±0.00 N/A N/A N/A N/A N/A N/A 41.075±0.00 56.655±14.81
ENST00000571518 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 44.626±0.00 53.356±0.00 77.662±0.00
ENST00000571647 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571885 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572392 14.392±0.00 19.472±0.00 5.766±0.00 5.492±0.00 N/A 6.517±0.00 7.674±0.00 N/A 4.244±0.00 N/A 27.537±0.00 N/A N/A 27.013±0.00
ENST00000573080 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000573320 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000573949 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575058 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575078 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576087 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576393 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576498 N/A N/A N/A N/A 4.506±0.00 N/A N/A 2.264±0.00 N/A N/A N/A N/A N/A N/A
ENST00000577012 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000214087 ENST00000397498 N/A N/A N/A 4.226±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000570561 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000570910 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571082 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.860±0.00 N/A N/A N/A
ENST00000572704 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572937 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000573392 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000573569 N/A N/A N/A N/A N/A N/A 2.084±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000573715 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574938 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.218±0.00 N/A N/A N/A
ENST00000576135 N/A N/A N/A 9.476±0.00 N/A N/A N/A N/A N/A N/A 2.567±0.00 N/A N/A N/A
ENST00000576914 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000577142 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000621051 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000622299 8.437±0.00 12.459±0.00 N/A 17.734±0.00 12.810±0.00 10.371±0.00 N/A 13.379±0.00 5.614±0.00 13.486±0.00 N/A 15.364±1.45 23.921±3.04 14.344±0.00
ENSG00000262049 ENST00000575312 9.217±0.00 15.910±0.00 N/A 18.101±0.00 11.697±0.00 9.013±0.00 5.847±0.00 17.027±0.00 7.101±0.00 12.968±0.00 21.103±0.00 17.282±2.69 15.343±0.08 17.362±0.00
ENSG00000262660 ENST00000571730 N/A N/A 0.430±0.00 N/A 0.426±0.00 N/A N/A N/A 1.009±0.00 N/A N/A 15.930±0.00 N/A 12.614±0.00
ENSG00000262814 ENST00000333676 N/A N/A N/A N/A N/A N/A N/A 6.335±0.00 N/A 0.025±0.00 N/A N/A N/A N/A
ENST00000541223 22.890±0.00 59.240±0.00 0.772±0.00 14.365±12.03 23.032±22.17 21.179±18.25 40.170±39.82 74.310±0.00 85.587±0.00 17.861±17.77 29.064±25.12 38.463±23.57 61.548±25.92 25.242±9.44
ENSG00000277784 ENST00000616843 N/A N/A N/A N/A N/A N/A N/A 0.481±0.00 N/A N/A N/A N/A N/A 0.422±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025793 ENSMUST00000026900 14.198±4.83 50.449±4.42 9.335±4.23 36.757±4.91 19.344±10.35 35.701±6.97 4.891±3.71 16.917±2.92 12.159±6.71 23.156±4.03 1.984±0.77 36.386±16.46 8.369±3.13 56.844±20.67
ENSMUST00000106203 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000106205 8.164±2.11 13.157±1.48 2.911±0.00 9.699±2.00 8.028±2.05 11.938±3.87 4.089±0.12 8.900±1.11 5.523±2.19 9.229±1.19 2.827±0.27 10.966±2.58 8.011±2.45 28.776±9.37
ENSMUST00000135231 N/A N/A N/A 59.871±0.00 N/A N/A N/A N/A N/A N/A N/A 69.933±0.00 52.891±1.72 104.704±0.00
ENSMUST00000140862 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141826 N/A N/A N/A 34.981±0.00 N/A N/A N/A N/A N/A N/A N/A 8.141±0.00 44.869±0.00 59.315±0.00
ENSMUSG00000039640 ENSMUST00000043627 40.100±6.97 106.695±100.20 32.580±2.04 27.595±4.41 54.626±36.99 114.051±79.12 47.921±18.55 126.330±17.31 79.921±32.18 26.188±3.44 38.905±11.49 44.297±17.86 52.090±21.85 18.978±3.97
ENSMUST00000137619 25.433±11.66 421.479±34.00 N/A 15.583±0.00 55.709±21.97 N/A 24.885±6.48 59.744±0.00 29.435±10.69 N/A 14.358±0.79 13.109±3.37 30.909±15.15 11.308±0.61
ENSMUSG00000097658 ENSMUST00000180595 N/A N/A N/A 5.370±0.00 N/A N/A N/A N/A N/A N/A N/A 6.166±0.00 4.009±0.00 5.311±0.00

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