C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: methyltransferase like 23
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000106370 Mettl23-001 ENSMUSG00000090266 10090 + 11:116843278-116849740 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleENSMUST00000106370
Transcript ID Muscle
ENSMUST00000106370 35.557±1.58

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000FJ CIL_0000FJ_0002 CGP 11:116803062-116843449
CIL_0003KF CIL_0003KF_0003 CGP 11:116837432-116854263
CIL_0003KE CIL_0003KE_0003 CGP 11:116843278-116854263

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005737 IEA cytoplasm
GO:0008150 ND biological_process
GO:0008168 IEA methyltransferase activity
GO:0016021 IEA integral component of membrane
GO:0032259 IEA methylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000303996 JMJD6-003 nonsense_mediated_decay Homo_sapiens 2e-27 128
ENST00000341249 METTL23-001 protein_coding Homo_sapiens 0 723
ENST00000445478 JMJD6-001 protein_coding Homo_sapiens 3e-20 106
ENST00000542934 JMJD6-002 nonsense_mediated_decay Homo_sapiens 2e-27 128
ENST00000586738 METTL23-004 protein_coding Homo_sapiens 0 651
ENST00000588563 METTL23-013 protein_coding Homo_sapiens 0 592
ENST00000588783 METTL23-006 protein_coding Homo_sapiens 0 704
ENST00000589581 METTL23-015 retained_intron Homo_sapiens 0 375
ENST00000589977 METTL23-011 protein_coding Homo_sapiens 0 431
ENST00000592849 METTL23-010 protein_coding Homo_sapiens 0 488
ENST00000615984 METTL23-201 protein_coding Homo_sapiens 0 669
ENST00000617192 JMJD6-201 protein_coding Homo_sapiens 6e-27 128

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