C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: jumonji domain containing 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000542934 JMJD6-002 ENSG00000070495 9606 - 17:76718446-76726784 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderENST00000542934
Transcript ID Adrenal Bladder
ENST00000542934 1.977±0.00 0.165±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000FJ CIL_0000FJ_0001 CGP 17:76672551-76726799
CIL_0003KF CIL_0003KF_0002 CGP 17:76712832-76733936

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000140513 Jmjd6-005 nonsense_mediated_decay Mus_musculus 0 1546
ENSMUST00000140349 Jmjd6-006 nonsense_mediated_decay Mus_musculus 0 1496
ENSMUST00000047616 Jmjd6-001 protein_coding Mus_musculus 0 1375
ENSMUST00000141735 Jmjd6-007 retained_intron Mus_musculus 0 1275
ENSMUST00000142495 Jmjd6-002 nonsense_mediated_decay Mus_musculus 0 1151
ENSMUST00000130120 Jmjd6-003 retained_intron Mus_musculus 0 1086
ENSMUST00000124831 Jmjd6-004 protein_coding Mus_musculus 0 472
ENSMUST00000106370 Mettl23-001 protein_coding Mus_musculus 2e-27 128

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