C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: partner and localizer of BRCA2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000106469 Palb2-002 ENSMUSG00000044702 10090 - 7:122107262-122132844 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000106469
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000106469 0.565±0.23 0.330±0.06 0.185±0.00 0.301±0.15 0.576±0.22 0.419±0.22 0.078±0.03 0.271±0.08 0.978±1.14 0.097±0.02 0.104±0.00 1.031±0.57 0.818±0.42 0.616±0.35

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003VC CIL_0003VC_0003 CGP 7:122085403-122132946
CIL_0006D1 CIL_0006D1_0002 CGP 7:122107262-122149044

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000724 ISS double-strand break repair via homologous recombination
GO:0001756 IMP somitogenesis
GO:0001833 IMP inner cell mass cell proliferation
GO:0003677 ISS DNA binding
GO:0007498 IMP mesoderm development
GO:0009887 IMP organ morphogenesis
GO:0036342 IMP post-anal tail morphogenesis
GO:0043066 IMP negative regulation of apoptotic process

Homologs

No Homologs available.

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