C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: adhesion molecule with Ig like domain 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000106659 Amigo1-003 ENSMUSG00000050947 10090 + 3:108186350-108191777 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000106659
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000106659 1.712±0.26 12.715±3.69 5.834±1.55 5.509±1.04 2.159±0.00 3.327±0.52 1.724±1.07 4.117±1.31 7.815±1.69 0.714±0.00 0.388±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099A CIL_00099A_0002 VISTA 3:108089934-108692442
CIL_00098X CIL_00098X_0002 VISTA 3:108109603-108712500

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005886 IEA plasma membrane
GO:0007155 ISO cell adhesion
GO:0007156 ISS homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007157 ISS heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0007409 ISO axonogenesis
GO:0007413 ISS axonal fasciculation
GO:0016021 ISO integral component of membrane
GO:0042552 ISS myelination
GO:0050772 ISS positive regulation of axonogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000369862 AMIGO1-002 protein_coding Homo_sapiens 0 1260
ENST00000369864 AMIGO1-001 protein_coding Homo_sapiens 0 1088

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