C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: junction plakoglobin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000107403 Jup-002 ENSMUSG00000001552 10090 - 11:100372296-100397749 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000107403
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000107403 10.355±0.41 19.105±5.84 15.155±7.88 29.686±4.76 78.920±18.18 19.268±1.94 18.361±0.00 5.362±1.48 89.307±15.08 34.012±7.45 296.127±23.39 13.062±3.61

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000TS CIL_0000TS_0003 CGP 11:100347327-100397763
CIL_0005NQ CIL_0005NQ_0002 CGP 11:100368958-100414836

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000902 IBA cell morphogenesis
GO:0002159 IMP desmosome assembly
GO:0003136 IBA negative regulation of heart induction by canonical Wnt signaling pathway
GO:0003181 IBA atrioventricular valve morphogenesis
GO:0003308 IBA negative regulation of Wnt signaling pathway involved in heart development
GO:0003713 IBA transcription coactivator activity
GO:0005198 IBA structural molecule activity
GO:0005515 IPI protein binding
GO:0005829 IDA cytosol
GO:0005882 IDA intermediate filament
GO:0005911 IDA cell-cell junction
GO:0005913 IDA cell-cell adherens junction
GO:0005915 IBA zonula adherens
GO:0005916 IBA fascia adherens
GO:0007016 IBA cytoskeletal anchoring at plasma membrane
GO:0007155 IDA cell adhesion
GO:0007369 IBA gastrulation
GO:0007398 IBA ectoderm development
GO:0007399 IBA nervous system development
GO:0009898 IBA cytoplasmic side of plasma membrane
GO:0015629 IBA actin cytoskeleton
GO:0016020 IDA membrane
GO:0016323 IBA basolateral plasma membrane
GO:0016331 IBA morphogenesis of embryonic epithelium
GO:0016337 IMP single organismal cell-cell adhesion
GO:0016342 IBA catenin complex
GO:0019901 IBA protein kinase binding
GO:0030018 IDA Z disc
GO:0030057 IDA desmosome
GO:0030877 IBA beta-catenin destruction complex
GO:0043588 IMP skin development
GO:0045294 IPI alpha-catenin binding
GO:0045296 IBA cadherin binding
GO:0045944 IBA positive regulation of transcription from RNA polymerase II promoter
GO:0048599 IBA oocyte development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000148794 jupb-001 protein_coding Danio_rerio 0 942
ENSDART00000082080 jupb-201 protein_coding Danio_rerio 0 929
ENSDART00000003891 jupa-001 protein_coding Danio_rerio 0 848
ENSDART00000081018 jupa-201 protein_coding Danio_rerio 0 457
ENST00000310706 JUP-001 protein_coding Homo_sapiens 0 2909
ENST00000393930 JUP-004 protein_coding Homo_sapiens 0 2854
ENST00000393931 JUP-008 protein_coding Homo_sapiens 0 2909
ENST00000424457 JUP-003 protein_coding Homo_sapiens 3e-23 113
ENST00000585793 JUP-011 retained_intron Homo_sapiens 0 531
ENST00000589036 JUP-010 retained_intron Homo_sapiens 0 285
ENST00000591690 JUP-012 protein_coding Homo_sapiens 2e-23 113

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