C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: keratin 36
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000107416 Krt36-001 ENSMUSG00000020916 10090 - 11:100102007-100105626 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000107416
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000107416 0.680±0.43 0.196±0.07 0.074±0.02 0.009±0.00 1.285±0.55 0.792±0.32 0.035±0.01 0.040±0.01 0.006±0.00 0.137±0.04 0.037±0.00 0.358±0.25 0.236±0.24 0.015±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00056U CIL_00056U_0014 CGP 11:100092193-100105626
CIL_00056U CIL_00056U_000W CGP 11:100102007-100121566

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005882 IEA intermediate filament
GO:0030280 IDA structural constituent of epidermis
GO:0045111 IDA intermediate filament cytoskeleton
GO:0045616 IDA regulation of keratinocyte differentiation
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000246646 KRT38-001 protein_coding Homo_sapiens 0 422
ENST00000251645 KRT31-001 protein_coding Homo_sapiens 0 813
ENST00000328119 KRT36-002 protein_coding Homo_sapiens 0 1572
ENST00000393986 KRT36-001 protein_coding Homo_sapiens 0 1471
ENST00000394001 KRT34-001 protein_coding Homo_sapiens 0 741
ENST00000571312 RP1-18F17.1-001 protein_coding Homo_sapiens 0 741
ENST00000573281 KRT31-001 protein_coding Homo_sapiens 0 813
ENST00000576522 AC004231.7-001 protein_coding Homo_sapiens 0 736

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