C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: synaptotagmin XI
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000107505 Syt11-001 ENSMUSG00000068923 10090 - 3:88744700-88775164 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000107505
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000107505 0.804±0.39 1.009±0.09 0.625±0.00 0.949±0.38 0.399±0.00 1.645±0.18 1.269±0.58 0.273±0.14 0.705±0.14 0.614±0.29 0.781±0.09 0.272±0.04 6.955±3.46

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008P5 CIL_0008P5_0002 VISTA 3:88218217-88823366
CIL_000898 CIL_000898_0002 VISTA 3:88224783-88827970

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0005509 ISS calcium ion binding
GO:0005515 IPI protein binding
GO:0005544 ISS calcium-dependent phospholipid binding
GO:0005887 IDA integral component of plasma membrane
GO:0006810 IEA transport
GO:0008021 IEA synaptic vesicle
GO:0030054 IEA cell junction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000368324 SYT11-001 protein_coding Homo_sapiens 0 1899

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