C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tudor domain containing 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000107777 Tdrd7-001 ENSMUSG00000035517 10090 + 4:45965334-46034761 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonLiverLungOvaryPlacentaENSMUST00000107777
Transcript ID Adrenal Breast Colon Liver Lung Ovary Placenta
ENSMUST00000107777 2.559±1.33 0.693±0.00 3.011±1.43 1.064±0.55 1.336±0.00 3.575±2.54 6.153±1.54

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00086Q CIL_00086Q_0002 VISTA 4:45528456-46131469
CIL_0002JB CIL_0002JB_0002 CGP 4:45890303-46034761
CIL_0007HJ CIL_0007HJ_0003 CGP 4:45965334-46116032

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002089 IMP lens morphogenesis in camera-type eye
GO:0003729 ISS mRNA binding
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0005759 IEA mitochondrial matrix
GO:0007281 IDA germ cell development
GO:0007283 IMP spermatogenesis
GO:0010608 ISS posttranscriptional regulation of gene expression
GO:0030529 IDA ribonucleoprotein complex
GO:0033391 IDA chromatoid body
GO:0035770 ISS ribonucleoprotein granule
GO:0043186 IDA P granule
GO:0047485 IEA protein N-terminus binding
GO:0070306 IMP lens fiber cell differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000355295 TDRD7-001 protein_coding Homo_sapiens 0 2809
ENST00000492428 TDRD7-002 processed_transcript Homo_sapiens 0 228

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