C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | clathrin, light polypeptide (Lca) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000107846  |
Clta-001 |
ENSMUSG00000028478 |
10090 | + |
4:44004452-44032846  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0006K2 | CIL_0006K2_0002 | CGP | 4:43983483-44032846 |
| CIL_0006K3 | CIL_0006K3_0002 | CGP | 4:44004452-44084177 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005198 | IEA | structural molecule activity |
| GO:0006886 | IEA | intracellular protein transport |
| GO:0016192 | IEA | vesicle-mediated transport |
| GO:0030130 | IEA | clathrin coat of trans-Golgi network vesicle |
| GO:0030132 | IEA | clathrin coat of coated pit |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000242285
|
CLTA-001 | protein_coding | Homo_sapiens | 0 | 688 |
|
ENST00000345519
|
CLTA-002 | protein_coding | Homo_sapiens | 0 | 1323 |
|
ENST00000396603
|
CLTA-004 | protein_coding | Homo_sapiens | 0 | 682 |
|
ENST00000433436
|
CLTA-201 | protein_coding | Homo_sapiens | 0 | 701 |
|
ENST00000464497
|
CLTA-008 | nonsense_mediated_decay | Homo_sapiens | 0 | 684 |
|
ENST00000466396
|
CLTA-005 | protein_coding | Homo_sapiens | 0 | 309 |
|
ENST00000470744
|
CLTA-003 | protein_coding | Homo_sapiens | 0 | 680 |
|
ENST00000493185
|
CLTA-007 | nonsense_mediated_decay | Homo_sapiens | 0 | 806 |
|
ENST00000538225
|
CLTA-202 | protein_coding | Homo_sapiens | 0 | 688 |
|
ENST00000540080
|
CLTA-203 | protein_coding | Homo_sapiens | 0 | 806 |
|
ENST00000544818
|
RP11-444J21.2-001 | processed_pseudogene | Homo_sapiens | 0 | 490 |
