C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: clathrin, light chain A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000433436 CLTA-201 ENSG00000122705 9606 + 9:36190856-36212061 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006K2 CIL_0006K2_0001 CGP 9:36169394-36304781
CIL_0006K3 CIL_0006K3_0001 CGP 9:36190856-36304781

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005198 IEA structural molecule activity
GO:0005515 IPI protein binding
GO:0005829 TAS cytosol
GO:0005886 TAS plasma membrane
GO:0006886 IEA intracellular protein transport
GO:0006892 TAS post-Golgi vesicle-mediated transport
GO:0007173 TAS epidermal growth factor receptor signaling pathway
GO:0007411 TAS axon guidance
GO:0016020 IDA membrane
GO:0016023 ISS cytoplasmic membrane-bounded vesicle
GO:0016192 IEA vesicle-mediated transport
GO:0019886 TAS antigen processing and presentation of exogenous peptide antigen via MHC class II
GO:0030118 NAS clathrin coat
GO:0030130 IEA clathrin coat of trans-Golgi network vesicle
GO:0030132 IEA clathrin coat of coated pit
GO:0030669 TAS clathrin-coated endocytic vesicle membrane
GO:0032050 IPI clathrin heavy chain binding
GO:0032588 TAS trans-Golgi network membrane
GO:0042059 TAS negative regulation of epidermal growth factor receptor signaling pathway
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0048011 TAS neurotrophin TRK receptor signaling pathway
GO:0061024 TAS membrane organization
GO:0071439 IDA clathrin complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000107851 Clta-003 protein_coding Mus_musculus 0 1472
ENSMUST00000107849 Clta-002 protein_coding Mus_musculus 0 763
ENSMUST00000107847 Clta-005 protein_coding Mus_musculus 0 708
ENSMUST00000170241 Clta-201 protein_coding Mus_musculus 0 701
ENSMUST00000107846 Clta-001 protein_coding Mus_musculus 0 701
ENSMUST00000107845 Clta-004 protein_coding Mus_musculus 0 645

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