C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | clathrin, light chain A | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000464497  |
CLTA-008 |
ENSG00000122705 |
9606 | + |
9:36190931-36304781  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0006K2 | CIL_0006K2_0001 | CGP | 9:36169394-36304781 |
| CIL_0006K3 | CIL_0006K3_0001 | CGP | 9:36190856-36304781 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005198 | IEA | structural molecule activity |
| GO:0006886 | IEA | intracellular protein transport |
| GO:0016192 | IEA | vesicle-mediated transport |
| GO:0030130 | IEA | clathrin coat of trans-Golgi network vesicle |
| GO:0030132 | IEA | clathrin coat of coated pit |
| GO:0043231 | IDA | intracellular membrane-bounded organelle |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000170241
|
Clta-201 | protein_coding | Mus_musculus | 0 | 684 |
|
ENSMUST00000107846
|
Clta-001 | protein_coding | Mus_musculus | 0 | 684 |
|
ENSMUST00000107851
|
Clta-003 | protein_coding | Mus_musculus | 0 | 680 |
|
ENSMUST00000107849
|
Clta-002 | protein_coding | Mus_musculus | 0 | 680 |
|
ENSMUST00000107847
|
Clta-005 | protein_coding | Mus_musculus | 0 | 680 |
|
ENSMUST00000107845
|
Clta-004 | protein_coding | Mus_musculus | 0 | 636 |
|
ENSMUST00000168162
|
Pdgfra-202 | protein_coding | Mus_musculus | 0.00003 | 55 |
|
ENSMUST00000000476
|
Pdgfra-201 | protein_coding | Mus_musculus | 0.00003 | 55 |
