C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: BTB and CNC homology 1, basic leucine zipper transcription factor 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000343122 BACH2-005 ENSG00000112182 9606 - 6:89931485-90296742 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonHeartKidneyOvaryTestisENST00000343122
Transcript ID Colon Heart Kidney Ovary Testis
ENST00000343122 0.243±0.00 0.163±0.00 0.082±0.00 0.053±0.00 0.484±0.31

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001Y4 CIL_0001Y4_0002 CGP 6:89894469-90296908
CIL_0008MG CIL_0008MG_0001 VISTA 6:89917263-90520553
CIL_0001Y5 CIL_0001Y5_0002 CGP 6:89926529-90587045

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000108180 Bach2-001 protein_coding Mus_musculus 0 3975
ENSMUST00000171600 Bach2-201 protein_coding Mus_musculus 0 3742
ENSMUST00000037416 Bach2-002 protein_coding Mus_musculus 0 1866
ENSMUST00000146748 Bach2-005 processed_transcript Mus_musculus 0 375
ENSDART00000028717 bach2b-201 protein_coding Danio_rerio 0 302
ENSDART00000131857 bach2b-001 protein_coding Danio_rerio 0 302
ENSMUST00000149201 Bach2-003 processed_transcript Mus_musculus 0 289
ENSMUST00000125263 Bach2-006 processed_transcript Mus_musculus 0 255

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