C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calpain, small subunit 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000108196 Capns1-002 ENSMUSG00000001794 10090 - 7:30186990-30193106 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000108196
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000108196 167.796±31.26 227.132±79.21 38.984±0.00 30.747±10.75 283.601±39.45 215.573±94.38 95.302±23.70 65.842±32.08 41.302±16.60 162.579±26.90 32.352±4.12 166.764±58.34 110.276±90.69 93.403±42.13

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004198 IMP calcium-dependent cysteine-type endopeptidase activity
GO:0005509 IEA calcium ion binding
GO:0005737 IBA cytoplasm
GO:0005886 IEA plasma membrane
GO:0006508 IBA proteolysis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000246533 CAPNS1-001 protein_coding Homo_sapiens 0 787
ENST00000586851 CAPNS1-012 protein_coding Homo_sapiens 0 484
ENST00000586963 CAPNS1-010 protein_coding Homo_sapiens 0 590
ENST00000587718 CAPNS1-003 protein_coding Homo_sapiens 0 715
ENST00000588780 CAPNS1-007 protein_coding Homo_sapiens 0 466
ENST00000588815 CAPNS1-002 protein_coding Homo_sapiens 0 787
ENST00000589146 CAPNS1-004 protein_coding Homo_sapiens 0 333
ENST00000589162 CAPNS1-014 retained_intron Homo_sapiens 0 320
ENST00000590049 CAPNS1-011 non_stop_decay Homo_sapiens 0 612
ENST00000590874 CAPNS1-008 protein_coding Homo_sapiens 0 638
ENST00000591041 CAPNS1-006 protein_coding Homo_sapiens 0 381
ENST00000592354 CAPNS1-009 protein_coding Homo_sapiens 0 529

Loading