C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted pseudogene 7452
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000108332 Gm7452-201 ENSMUSG00000058661 10090 + 6:36956644-36960417 pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000108332
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000108332 0.195±0.11 0.063±0.02 0.577±0.07 0.879±0.03 0.268±0.07 0.156±0.11 0.168±0.04 0.171±0.04 0.204±0.09 0.284±0.06 0.379±0.05 0.409±0.40 0.616±0.06 0.843±0.49

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002Q6 CIL_0002Q6_0002 CGP 6:36715663-37300184
CIL_00011O CIL_00011O_0002 CGP 6:36846022-37442146

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000221355 ZNF780B-001 protein_coding Homo_sapiens 0 206
ENST00000316950 ZNF569-001 protein_coding Homo_sapiens 0.000000003 69
ENST00000340963 ZNF780A-201 protein_coding Homo_sapiens 0 353
ENST00000355202 ZNF607-001 protein_coding Homo_sapiens 0.0000000000004 82
ENST00000392149 ZNF569-002 protein_coding Homo_sapiens 0.000000002 69
ENST00000392150 ZNF569-201 protein_coding Homo_sapiens 0.000000001 69
ENST00000395835 ZNF607-002 protein_coding Homo_sapiens 0.0000000000003 82
ENST00000398253 ZFP90-201 protein_coding Homo_sapiens 1e-17 97
ENST00000434248 ZNF780B-002 protein_coding Homo_sapiens 0 326
ENST00000448051 ZNF569-003 protein_coding Homo_sapiens 0.000000004 68
ENST00000450241 ZNF780A-001 protein_coding Homo_sapiens 0 353
ENST00000455521 ZNF780A-202 protein_coding Homo_sapiens 0 363
ENST00000563169 ZFP90-010 protein_coding Homo_sapiens 7e-18 97
ENST00000564558 ZFP90-002 nonsense_mediated_decay Homo_sapiens 1e-17 97
ENST00000570495 ZFP90-001 protein_coding Homo_sapiens 1e-17 97
ENST00000571720 ZFP90-024 retained_intron Homo_sapiens 1e-17 97
ENST00000594395 ZNF780A-008 protein_coding Homo_sapiens 0 363
ENST00000595687 ZNF780A-009 protein_coding Homo_sapiens 0 353
ENST00000611377 CTD-2293H3.3-001 unprocessed_pseudogene Homo_sapiens 6e-21 104
ENST00000617676 ZNF780B-201 protein_coding Homo_sapiens 0 326

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