C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ZFP90 zinc finger protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000570495 ZFP90-001 ENSG00000184939 9606 + 16:68539213-68567131 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverMuscleOvaryPlacentaENST00000570495
Transcript ID Brain Liver Muscle Ovary Placenta
ENST00000570495 0.662±0.00 1.223±0.00 0.340±0.00 0.764±0.00 0.472±0.17

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005WZ CIL_0005WZ_0001 CGP 16:68358325-68576072

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IEA negative regulation of transcription from RNA polymerase II promoter
GO:0001078 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0043392 IEA negative regulation of DNA binding
GO:0045892 IEA negative regulation of transcription, DNA-templated
GO:0045893 IMP positive regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034382 Zfp90-201 protein_coding Mus_musculus 0 1748
ENSMUST00000110216 Zfp930-201 protein_coding Mus_musculus 0 195
ENSMUST00000072427 Gm10033-201 protein_coding Mus_musculus 0 193
ENSMUST00000165640 Zfp113-201 protein_coding Mus_musculus 9.94922e-44 183
ENSMUST00000049393 Zfp113-001 protein_coding Mus_musculus 9.94922e-44 183
ENSMUST00000063216 5730507C01Rik-201 protein_coding Mus_musculus 8e-40 171
ENSMUST00000177778 5730507C01Rik-202 protein_coding Mus_musculus 8e-40 171
ENSMUST00000127027 Zfp960-001 protein_coding Mus_musculus 2e-36 159
ENSMUST00000147630 Zfp97-001 protein_coding Mus_musculus 8e-35 154
ENSMUST00000078257 D130040H23Rik-201 protein_coding Mus_musculus 1e-33 150
ENSMUST00000187616 9830147E19Rik-201 protein_coding Mus_musculus 5e-32 145
ENSMUST00000098503 9830147E19Rik-003 protein_coding Mus_musculus 5e-32 145
ENSMUST00000107994 9830147E19Rik-001 processed_transcript Mus_musculus 5e-32 145
ENSMUST00000079642 Zfp119a-001 protein_coding Mus_musculus 6e-31 141
ENSMUST00000098509 AW146154-001 protein_coding Mus_musculus 2e-30 139
ENSMUST00000109916 Zfp442-001 protein_coding Mus_musculus 3e-29 135
ENSMUST00000099439 Gm4767-201 protein_coding Mus_musculus 3e-29 135
ENSMUST00000188096 Gm4767-001 protein_coding Mus_musculus 3e-29 135
ENSMUST00000105315 Gm10778-201 protein_coding Mus_musculus 3e-29 135
ENSMUST00000189672 Gm10778-001 protein_coding Mus_musculus 3e-29 135
ENSMUST00000166837 Gm17067-001 protein_coding Mus_musculus 1e-27 130
ENSMUST00000108007 Gm20939-201 protein_coding Mus_musculus 1e-27 130
ENSMUST00000185796 Zfp442-201 protein_coding Mus_musculus 5e-27 128
ENSMUST00000068822 Zfp37-001 protein_coding Mus_musculus 2e-26 126
ENSMUST00000089906 Zfp951-201 protein_coding Mus_musculus 2e-26 126
ENSMUST00000186219 Zfp951-002 protein_coding Mus_musculus 2e-26 126
ENSMUST00000156218 Zfp938-002 nonsense_mediated_decay Mus_musculus 2e-26 126
ENSMUST00000041264 Zfp938-001 protein_coding Mus_musculus 2e-26 126
ENSMUST00000112547 4930522L14Rik-002 protein_coding Mus_musculus 2e-26 126
ENSMUST00000184117 2010315B03Rik-001 protein_coding Mus_musculus 6e-26 124
ENSMUST00000073782 Zfp937-001 protein_coding Mus_musculus 6e-26 124
ENSMUST00000177714 2010315B03Rik-001 protein_coding Mus_musculus 6e-26 124
ENSMUST00000091508 Zfp872-201 protein_coding Mus_musculus 2e-25 122
ENSMUST00000178901 Zfp872-001 protein_coding Mus_musculus 2e-25 122
ENSMUST00000074982 Zfp868-201 protein_coding Mus_musculus 8e-25 121
ENSMUST00000121886 Zfp868-001 protein_coding Mus_musculus 8e-25 121
ENSMUST00000173035 Gm20541-001 unprocessed_pseudogene Mus_musculus 3e-24 119
ENSMUST00000092720 5430403G16Rik-001 protein_coding Mus_musculus 4e-23 115
ENSMUST00000189452 Zfp119b-002 protein_coding Mus_musculus 1e-22 113
ENSMUST00000056147 Zfp119b-001 protein_coding Mus_musculus 1e-22 113
ENSMUST00000152036 3300002I08Rik-003 processed_transcript Mus_musculus 5e-22 111
ENSMUST00000091481 Zfp72-201 protein_coding Mus_musculus 5e-22 111
ENSMUST00000187241 Zfp932-201 protein_coding Mus_musculus 2e-21 110
ENSMUST00000112536 Zfp932-003 protein_coding Mus_musculus 2e-21 110
ENSMUST00000112540 Zfp932-001 protein_coding Mus_musculus 2e-21 110
ENSMUST00000034647 Zfp558-003 protein_coding Mus_musculus 6e-21 108
ENSMUST00000174558 Gm2381-001 protein_coding Mus_musculus 6e-21 108
ENSMUST00000109929 Gm14139-201 protein_coding Mus_musculus 2e-20 106
ENSMUST00000109926 Gm14139-001 protein_coding Mus_musculus 2e-20 106
ENSMUST00000105313 Zfp873-201 protein_coding Mus_musculus 2e-20 106
ENSMUST00000130458 Zfp963-001 protein_coding Mus_musculus 8e-20 104
ENSMUST00000094538 Zfp120-201 protein_coding Mus_musculus 1e-18 100
ENSMUST00000089207 Zfp120-001 protein_coding Mus_musculus 1e-18 100
ENSMUST00000109931 Zfp120-003 protein_coding Mus_musculus 1e-18 100
ENSMUST00000122859 Zfp120-002 nonsense_mediated_decay Mus_musculus 1e-18 100
ENSMUST00000079237 Zfp125-201 protein_coding Mus_musculus 4e-18 99
ENSMUST00000108332 Gm7452-201 pseudogene Mus_musculus 1e-17 97
ENSMUST00000190566 Zfp708-002 protein_coding Mus_musculus 1e-17 97
ENSMUST00000109742 Zfp708-001 protein_coding Mus_musculus 1e-17 97
ENSMUST00000109743 RSLCAN18-202 protein_coding Mus_musculus 1e-17 97
ENSMUST00000186303 RSLCAN18-001 nonsense_mediated_decay Mus_musculus 1e-17 97
ENSMUST00000185856 RSLCAN18-004 processed_transcript Mus_musculus 1e-17 97
ENSMUST00000081618 Zfp780b-201 protein_coding Mus_musculus 1e-17 97
ENSMUST00000071804 AI987944-001 protein_coding Mus_musculus 2e-16 94
ENSMUST00000105718 Zfp933-001 protein_coding Mus_musculus 6e-16 92
ENSMUST00000184310 2010315B03Rik-003 protein_coding Mus_musculus 0.000000000000002 90
ENSMUST00000071300 2010315B03Rik-003 protein_coding Mus_musculus 0.000000000000002 90
ENSMUST00000108949 Gm8898-003 protein_coding Mus_musculus 0.000000000000008 88
ENSMUST00000179061 Gm4245-001 protein_coding Mus_musculus 0.000000000000008 88
ENSMUST00000109047 Gm4723-002 protein_coding Mus_musculus 0.000000000000008 88
ENSMUST00000149782 Gm20422-001 protein_coding Mus_musculus 0.000000000000008 88
ENSMUST00000178443 Gm14431-202 protein_coding Mus_musculus 0.000000000000008 88
ENSMUST00000087654 Zfp763-001 protein_coding Mus_musculus 0.0000000000001 84
ENSMUST00000098639 1700049G17Rik-001 protein_coding Mus_musculus 0.0000000000004 82
ENSMUST00000163475 2610021A01Rik-001 protein_coding Mus_musculus 0.000000000001 81
ENSMUST00000125213 Zfp932-004 protein_coding Mus_musculus 0.000000000005 79
ENSMUST00000045228 Zkscan8-001 protein_coding Mus_musculus 0.000000000005 79
ENSMUST00000189658 2010315B03Rik-002 protein_coding Mus_musculus 0.00000000002 77
ENSMUST00000191281 2010315B03Rik-005 protein_coding Mus_musculus 0.00000000002 77
ENSMUST00000154063 Zfp963-002 protein_coding Mus_musculus 0.00000000002 77
ENSMUST00000185949 2010315B03Rik-002 protein_coding Mus_musculus 0.00000000002 77
ENSMUST00000189915 2010315B03Rik-005 protein_coding Mus_musculus 0.00000000002 77
ENSMUST00000107992 Gm5595-001 protein_coding Mus_musculus 0.00000000006 75
ENSMUST00000072014 Gm10330-201 protein_coding Mus_musculus 0.00000000006 75
ENSMUST00000143639 Zfp932-005 protein_coding Mus_musculus 0.0000000002 73
ENSMUST00000167565 Zfp712-201 protein_coding Mus_musculus 0.0000000002 73
ENSMUST00000020628 Zfp354a-201 protein_coding Mus_musculus 0.00000004 66
ENSMUST00000109119 Zfp354a-002 protein_coding Mus_musculus 0.00000004 66
ENSMUST00000109122 Zfp354a-004 protein_coding Mus_musculus 0.00000004 66
ENSMUST00000102766 Zfp354a-001 protein_coding Mus_musculus 0.00000004 66
ENSMUST00000135798 Zfp933-002 protein_coding Mus_musculus 0.0000001 64
ENSMUST00000080987 Zfp869-201 protein_coding Mus_musculus 0.0000001 64
ENSMUST00000063463 Gm21994-201 protein_coding Mus_musculus 0.0000005 62
ENSMUST00000108331 Zfp59-201 protein_coding Mus_musculus 0.000007 58
ENSMUST00000098970 Zfp26-002 retained_intron Mus_musculus 0.00002 57
ENSMUST00000159569 Zfp26-001 protein_coding Mus_musculus 0.00002 57
ENSMUST00000049705 Zfp457-201 protein_coding Mus_musculus 0.00008 55
ENSMUST00000092528 Gm10324-201 protein_coding Mus_musculus 0.00008 55
ENSMUST00000007884 Zfp54-001 protein_coding Mus_musculus 0.00008 55
ENSMUST00000165230 Zfp54-002 protein_coding Mus_musculus 0.00008 55

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