C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: POU domain, class 2, transcription factor 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000108417 Pou2f2-002 ENSMUSG00000008496 10090 - 7:25092520-25132488 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonKidneyLiverLungOvaryENSMUST00000108417
Transcript ID Adipose Adrenal Breast Colon Kidney Liver Lung Ovary
ENSMUST00000108417 0.313±0.00 0.512±0.12 3.606±1.55 0.571±0.29 0.310±0.12 0.085±0.00 0.900±0.12 0.432±0.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003DQ CIL_0003DQ_0002 CGP 7:25077205-25159922
CIL_0003X4 CIL_0003X4_0002 CGP 7:25087344-25219859

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002335 IMP mature B cell differentiation
GO:0002380 IMP immunoglobulin secretion involved in immune response
GO:0003677 IDA DNA binding
GO:0003700 IDA sequence-specific DNA binding transcription factor activity
GO:0005634 IDA nucleus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IDA regulation of transcription, DNA-templated
GO:0019904 IPI protein domain specific binding
GO:0043565 IDA sequence-specific DNA binding
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0048305 IMP immunoglobulin secretion
GO:0048469 IMP cell maturation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000049323 pou2f2b-201 protein_coding Danio_rerio 0 351
ENSDART00000141032 pou2f2b-001 protein_coding Danio_rerio 0 351
ENST00000260264 POU2F3-006 protein_coding Homo_sapiens 0 272
ENST00000342301 POU2F2-002 protein_coding Homo_sapiens 0 1831
ENST00000389341 POU2F2-001 protein_coding Homo_sapiens 0 2272
ENST00000524801 POU2F2-011 processed_transcript Homo_sapiens 0 230
ENST00000526816 POU2F2-005 protein_coding Homo_sapiens 0 1786
ENST00000526831 POU2F2-010 protein_coding Homo_sapiens 0 368
ENST00000528894 POU2F2-009 protein_coding Homo_sapiens 0 492
ENST00000529067 POU2F2-003 protein_coding Homo_sapiens 0 1502
ENST00000529952 POU2F2-004 protein_coding Homo_sapiens 0 1345
ENST00000530982 POU2F2-013 retained_intron Homo_sapiens 0 492
ENST00000531773 POU2F2-007 processed_transcript Homo_sapiens 0 357
ENST00000532176 POU2F2-012 processed_transcript Homo_sapiens 0 510
ENST00000532638 POU2F3-003 retained_intron Homo_sapiens 0 204
ENST00000532663 POU2F3-005 protein_coding Homo_sapiens 1.99993e-41 172
ENST00000533548 POU2F2-014 protein_coding Homo_sapiens 0 392
ENST00000533620 POU2F3-002 nonsense_mediated_decay Homo_sapiens 0 272
ENST00000534559 POU2F2-006 nonsense_mediated_decay Homo_sapiens 0 1738
ENST00000543440 POU2F3-001 protein_coding Homo_sapiens 0 272
ENST00000558596 POU2F2-018 protein_coding Homo_sapiens 0 237
ENST00000560398 POU2F2-017 protein_coding Homo_sapiens 0 2597
ENST00000560558 POU2F2-016 protein_coding Homo_sapiens 0 2076
ENST00000560804 POU2F2-015 protein_coding Homo_sapiens 0 2198
ENST00000598842 POU2F2-008 protein_coding Homo_sapiens 0 497

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