C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: striatin, calmodulin binding protein 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000108495 Strn4-002 ENSMUSG00000030374 10090 + 7:16816317-16840927 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000108495
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000108495 32.356±5.13 44.640±6.33 27.588±1.12 51.434±16.38 32.421±14.09 47.222±7.52 18.678±2.83 28.247±2.58 16.464±4.74 54.805±2.70 3.057±0.74 42.286±15.06 16.573±5.17 43.728±7.05

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005516 IEA calmodulin binding
GO:0005737 IEA cytoplasm
GO:0008150 ND biological_process
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000263280 STRN4-001 protein_coding Homo_sapiens 0 2798
ENST00000391910 STRN4-002 protein_coding Homo_sapiens 0 2702
ENST00000435164 STRN4-003 nonsense_mediated_decay Homo_sapiens 0 905
ENST00000539396 STRN4-004 protein_coding Homo_sapiens 0 2505
ENST00000593979 STRN4-008 protein_coding Homo_sapiens 0 599
ENST00000594287 STRN4-021 protein_coding Homo_sapiens 0 739
ENST00000594357 STRN4-018 processed_transcript Homo_sapiens 0 900
ENST00000594581 STRN4-006 retained_intron Homo_sapiens 0 798
ENST00000594704 STRN4-010 nonsense_mediated_decay Homo_sapiens 0 640
ENST00000594847 STRN4-014 retained_intron Homo_sapiens 0 695
ENST00000595357 STRN4-005 retained_intron Homo_sapiens 0 1360
ENST00000596012 STRN4-009 protein_coding Homo_sapiens 0 416
ENST00000597021 STRN4-013 protein_coding Homo_sapiens 0 496
ENST00000597063 STRN4-012 protein_coding Homo_sapiens 0 521
ENST00000598074 STRN4-022 retained_intron Homo_sapiens 0 279
ENST00000599231 STRN4-016 retained_intron Homo_sapiens 0 675
ENST00000600358 STRN4-017 nonsense_mediated_decay Homo_sapiens 0 832
ENST00000600615 STRN4-023 protein_coding Homo_sapiens 0 665
ENST00000600710 STRN4-011 processed_transcript Homo_sapiens 0 448
ENST00000601631 STRN4-020 retained_intron Homo_sapiens 0 968
ENST00000601869 STRN4-007 retained_intron Homo_sapiens 0 252
ENST00000602223 STRN4-019 processed_transcript Homo_sapiens 0 368

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