| Transcript ID | Breast | Liver | Muscle |
|---|---|---|---|
| ENSMUST00000108846 | 0.624±0.00 | 2.398±1.61 | 0.447±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000108846  |
Galnt10-002 |
ENSMUSG00000020520 |
10090 | + |
11:57645465-57726911  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0009C8 | CIL_0009C8_0002 | VISTA | 11:57350678-57952744 |
| CIL_00094E | CIL_00094E_0002 | VISTA | 11:57350713-57952688 |
| CIL_0001UE | CIL_0001UE_0002 | CGP | 11:57518664-57787514 |
| CIL_00099I | CIL_00099I_0002 | VISTA | 11:57547462-58147793 |
| CIL_00088D | CIL_00088D_0002 | VISTA | 11:57627590-58231336 |
| CIL_0001UJ | CIL_0001UJ_0002 | CGP | 11:57645442-57810217 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0004653 | IDA | polypeptide N-acetylgalactosaminyltransferase activity |
| GO:0006493 | IDA | protein O-linked glycosylation |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000297107
|
GALNT10-001 | protein_coding | Homo_sapiens | 0 | 571 |
|
ENST00000374298
|
AUNIP-001 | protein_coding | Homo_sapiens | 0.00000006 | 64 |
|
ENST00000377661
|
GALNT10-003 | protein_coding | Homo_sapiens | 0 | 568 |
|
ENST00000425427
|
GALNT10-005 | protein_coding | Homo_sapiens | 0 | 571 |
|
ENST00000519571
|
GALNT10-008 | processed_transcript | Homo_sapiens | 0 | 316 |
|
ENST00000520647
|
GALNT10-004 | nonsense_mediated_decay | Homo_sapiens | 0 | 571 |
|
ENST00000521781
|
GALNT10-007 | processed_transcript | Homo_sapiens | 0 | 318 |
|
ENST00000521786
|
GALNT10-006 | processed_transcript | Homo_sapiens | 0 | 265 |
