C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001UE_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000037749-ENSG00000164574 CGP 9606 5:154038906-154420984
GeneTranscriptPositionBiotype
ENSG00000037749 (MFAP3)
microfibrillar-associated protein 3 		ENST00000322602 (MFAP3-001) 154038993-154055033 protein_coding
ENST00000439768 (MFAP3-003) 154038959-154054052 protein_coding
ENST00000518497 (MFAP3-011) 154097023-154149940 processed_transcript
ENST00000519325 (MFAP3-012) 154097023-154220478 processed_transcript
ENST00000519612 (MFAP3-009) 154097023-154149947 processed_transcript
ENST00000519928 (MFAP3-006) 154049602-154053002 processed_transcript
ENST00000520327 (MFAP3-007) 154038968-154149947 processed_transcript
ENST00000520899 (MFAP3-005) 154038999-154049772 protein_coding
ENST00000521527 (MFAP3-008) 154038974-154135481 processed_transcript
ENST00000522177 (MFAP3-004) 154038994-154052952 protein_coding
ENST00000522440 (MFAP3-010) 154097023-154122021 processed_transcript
ENST00000522782 (MFAP3-002) 154038906-154052995 protein_coding
ENSG00000055147 (FAM114A2)
family with sequence similarity 114, member A2 		ENST00000351797 (FAM114A2-001) 153990128-154038919 protein_coding
ENST00000517605 (FAM114A2-012) 154034763-154037310 protein_coding
ENST00000517803 (FAM114A2-013) 154027295-154038921 processed_transcript
ENST00000518102 (FAM114A2-009) 154034278-154038910 protein_coding
ENST00000518735 (FAM114A2-018) 154026312-154027381 processed_transcript
ENST00000518900 (FAM114A2-015) 154028243-154038910 processed_transcript
ENST00000518914 (FAM114A2-019) 153992688-153997826 processed_transcript
ENST00000518946 (FAM114A2-020) 153992714-153995307 processed_transcript
ENST00000519808 (FAM114A2-007) 154033817-154038932 protein_coding
ENST00000520313 (FAM114A2-004) 153992955-154038907 protein_coding
ENST00000520667 (FAM114A2-006) 153992499-154038921 protein_coding
ENST00000521031 (FAM114A2-017) 154034763-154038747 processed_transcript
ENST00000522395 (FAM114A2-008) 154028149-154038936 protein_coding
ENST00000522634 (FAM114A2-011) 154034350-154038880 protein_coding
ENST00000522858 (FAM114A2-005) 153991703-154038866 protein_coding
ENST00000523705 (FAM114A2-014) 154028280-154038898 protein_coding
ENST00000524246 (FAM114A2-010) 154034908-154038898 protein_coding
ENST00000616320 (FAM114A2-201) 153992506-154038899 protein_coding
ENSG00000164574 (GALNT10)
polypeptide N-acetylgalactosaminyltransferase 10 		ENST00000297107 (GALNT10-001) 154190730-154420984 protein_coding
ENST00000377661 (GALNT10-003) 154190774-154419031 protein_coding
ENST00000425427 (GALNT10-005) 154190730-154389581 protein_coding
ENST00000517958 (GALNT10-002) 154403777-154419033 retained_intron
ENST00000519235 (GALNT10-010) 154402790-154409639 processed_transcript
ENST00000519544 (GALNT10-009) 154376317-154406256 processed_transcript
ENST00000519571 (GALNT10-008) 154287470-154376367 processed_transcript
ENST00000520647 (GALNT10-004) 154190735-154419012 nonsense_mediated_decay
ENST00000521781 (GALNT10-007) 154190997-154376420 processed_transcript
ENST00000521786 (GALNT10-006) 154190748-154219674 processed_transcript
ENSG00000241963 (RN7SL655P)
RNA, 7SL, cytoplasmic 655, pseudogene 		ENST00000486087 (RN7SL655P-201) 154349428-154349725 misc_RNA
ENSG00000245275 (SAP30L-AS1)
SAP30L antisense RNA 1 (head to head) 		ENST00000501280 (SAP30L-AS1-004) 154436001-154445850 antisense
ENST00000519727 (SAP30L-AS1-001) 154329437-154445819 antisense
ENST00000522312 (SAP30L-AS1-003) 154442997-154445822 antisense
ENST00000524264 (SAP30L-AS1-002) 154392171-154445813 antisense
ENSG00000253119 (HNRNPA3P7)
heterogeneous nuclear ribonucleoprotein A3 pseudogene 7 		ENST00000521638 (HNRNPA3P7-001) 154337471-154338452 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0001UE_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000020522-ENSMUSG00000020520 CGP 10090 11:57518664-57787514
GeneTranscriptPositionBiotype
ENSMUSG00000020520 (Galnt10)
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 		ENSMUST00000066987 (Galnt10-001) 57645442-57787514 protein_coding
ENSMUST00000108846 (Galnt10-002) 57645465-57726911 protein_coding
ENSMUSG00000020522 (Mfap3)
microfibrillar-associated protein 3 		ENSMUST00000020830 (Mfap3-002) 57518687-57533814 protein_coding
ENSMUST00000108848 (Mfap3-003) 57522964-57529526 protein_coding
ENSMUST00000108849 (Mfap3-001) 57518664-57533815 protein_coding
ENSMUST00000128971 (Mfap3-004) 57518686-57529089 retained_intron
ENSMUSG00000065806 (n-R5s69)
nuclear encoded rRNA 5S 69 		ENSMUST00000083872 (n-R5s69-201) 57764427-57764545 rRNA
ENSMUSG00000077155 (Gm24582)
predicted gene, 24582 		ENSMUST00000103967 (Gm24582-201) 57741300-57741402 snRNA
ENSMUSG00000085719 (4933424L21Rik)
RIKEN cDNA 4933424L21 gene 		ENSMUST00000142486 (4933424L21Rik-001) 57623698-57649494 antisense
ENSMUSG00000086028 (Gm12243)
predicted gene 12243 		ENSMUST00000128521 (Gm12243-001) 57572512-57574595 lincRNA
ENSMUSG00000086933 (4933426K07Rik)
RIKEN cDNA 4933426K07 gene 		ENSMUST00000143009 (4933426K07Rik-001) 57655415-57657826 antisense

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001UE_0001ENSG00000037749ENST00000322602ENSG00000055147ENST00000351797ENST00000520313ENST00000520667ENST00000522858ENST00000616320ENSG00000164574ENST00000297107ENST00000425427ENSG00000241963ENST00000486087ENSG00000245275ENST00000501280ENST00000519727ENST00000522312ENST00000524264ENSG00000253119ENST00000521638CIL_0001UE_0002ENSMUSG00000020520ENSMUST00000066987ENSMUST00000108846ENSMUSG00000020522ENSMUST00000020830ENSMUST00000108849ENSMUSG00000065806ENSMUST00000083872ENSMUSG00000077155ENSMUST00000103967ENSMUSG00000085719ENSMUST00000142486ENSMUSG00000086028ENSMUST00000128521ENSMUSG00000086933ENSMUST00000143009
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000037749 ENST00000322602 N/A 4.639±0.00 N/A 2.676±0.00 N/A N/A N/A N/A 1.808±0.00 N/A N/A 1.202±0.00 3.481±0.10 5.654±0.00
ENST00000439768 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518497 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519325 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519612 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519928 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520327 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520899 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521527 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522177 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522440 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522782 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000055147 ENST00000351797 N/A N/A N/A N/A N/A N/A 1.034±0.20 0.757±0.00 1.334±0.62 2.340±0.00 1.356±0.54 0.468±0.00 1.391±0.00 N/A
ENST00000517605 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000517803 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518102 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518735 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518900 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518914 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518946 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519808 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520313 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.298±0.00
ENST00000520667 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.708±0.00 N/A N/A
ENST00000521031 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522395 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522634 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522858 N/A 4.206±0.00 N/A 1.895±0.00 3.387±0.00 N/A N/A 1.496±0.00 1.757±0.00 N/A N/A 0.663±0.00 1.708±0.06 5.101±1.27
ENST00000523705 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524246 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000616320 N/A N/A N/A N/A N/A N/A 2.197±1.14 N/A N/A N/A 3.423±0.00 N/A 3.468±0.24 9.900±1.50
ENSG00000164574 ENST00000297107 6.228±0.00 3.090±0.00 2.053±0.00 2.990±1.53 4.165±0.00 5.412±3.49 3.252±0.00 8.677±0.00 2.048±0.20 7.572±0.00 2.007±0.00 22.694±15.47 2.735±0.13 5.243±1.75
ENST00000377661 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000425427 N/A N/A 1.323±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000517958 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519235 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519544 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519571 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520647 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521781 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521786 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000241963 ENST00000486087 0.057±0.00 0.176±0.00 N/A 0.129±0.00 N/A 0.111±0.00 0.286±0.00 0.121±0.00 N/A N/A N/A 0.744±0.00 N/A 0.054±0.00
ENSG00000245275 ENST00000501280 0.485±0.00 0.506±0.00 N/A N/A N/A N/A 0.321±0.19 0.228±0.00 N/A 0.223±0.00 N/A 0.089±0.01 0.151±0.00 0.447±0.21
ENST00000519727 N/A N/A N/A N/A 0.316±0.00 0.397±0.00 0.288±0.00 N/A N/A 0.185±0.00 N/A 0.199±0.05 N/A 0.446±0.00
ENST00000522312 0.102±0.00 0.553±0.00 N/A 0.238±0.00 N/A 0.353±0.00 0.097±0.00 0.532±0.00 0.156±0.00 0.073±0.00 N/A N/A N/A 0.426±0.14
ENST00000524264 0.072±0.00 1.042±0.00 0.970±0.00 0.345±0.00 1.414±0.83 0.960±0.75 0.055±0.02 0.933±0.00 0.855±0.79 1.087±1.03 N/A 0.887±1.09 0.214±0.00 0.503±0.16
ENSG00000253119 ENST00000521638 0.107±0.00 0.112±0.00 N/A 0.073±0.04 0.215±0.07 0.052±0.00 0.017±0.00 0.028±0.00 0.101±0.00 0.027±0.00 0.012±0.00 0.146±0.00 N/A 0.025±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020520 ENSMUST00000066987 6.478±0.76 18.757±2.13 7.395±0.57 4.002±1.98 6.409±3.10 34.525±5.64 1.986±0.16 4.963±0.14 5.151±4.22 3.851±0.63 1.428±0.41 13.190±2.03 5.493±0.88 9.719±2.86
ENSMUST00000108846 N/A N/A N/A N/A 0.624±0.00 N/A N/A N/A 2.398±1.61 N/A 0.447±0.00 N/A N/A N/A
ENSMUSG00000020522 ENSMUST00000020830 N/A 1.937±0.00 N/A 2.543±1.03 1.330±0.00 6.531±0.00 0.769±0.00 1.443±0.00 0.691±0.09 N/A N/A 3.288±0.00 2.425±0.65 1.140±0.00
ENSMUST00000108848 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000108849 10.098±1.87 7.128±1.08 9.757±0.87 8.012±5.13 9.569±1.06 7.463±0.68 2.763±0.57 5.754±1.65 4.226±1.08 9.871±1.60 2.218±0.37 9.965±3.96 7.333±3.28 4.443±2.04
ENSMUST00000128971 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000065806 ENSMUST00000083872 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 594.372±578.69
ENSMUSG00000077155 ENSMUST00000103967 N/A N/A N/A N/A N/A N/A N/A N/A 35.443±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000085719 ENSMUST00000142486 0.048±0.02 0.093±0.01 N/A N/A 0.102±0.06 0.068±0.00 0.039±0.01 N/A 0.010±0.00 0.039±0.00 0.048±0.01 0.074±0.03 0.034±0.00 2.960±0.00
ENSMUSG00000086028 ENSMUST00000128521 N/A N/A 0.044±0.02 0.076±0.03 N/A N/A N/A 0.057±0.02 0.027±0.00 N/A 0.058±0.02 0.084±0.00 0.030±0.02 0.034±0.00
ENSMUSG00000086933 ENSMUST00000143009 0.034±0.01 0.071±0.02 0.012±0.01 0.037±0.01 0.104±0.04 0.125±0.03 0.026±0.01 0.025±0.01 0.043±0.02 0.036±0.02 0.022±0.01 0.071±0.03 0.020±0.00 3.663±0.92

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