C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 208
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000109372 Tmem208-005 ENSMUSG00000014856 10090 + 8:105326455-105334801 nonsense_mediated_decay

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005K1 CIL_0005K1_0002 CGP 8:105312341-105335219
CIL_0005K2 CIL_0005K2_0002 CGP 8:105326354-105347953

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000258201 FHOD1-001 protein_coding Homo_sapiens 3e-19 102
ENST00000304800 TMEM208-001 protein_coding Homo_sapiens 0 401
ENST00000561586 TMEM208-006 retained_intron Homo_sapiens 0 399
ENST00000561922 FHOD1-003 nonsense_mediated_decay Homo_sapiens 1e-19 102
ENST00000562235 TMEM208-002 nonsense_mediated_decay Homo_sapiens 0 399
ENST00000562266 FHOD1-009 retained_intron Homo_sapiens 3e-20 102
ENST00000563168 TMEM208-003 retained_intron Homo_sapiens 0 200
ENST00000563271 TMEM208-009 retained_intron Homo_sapiens 5e-39 165
ENST00000563426 TMEM208-008 processed_transcript Homo_sapiens 6.00036e-42 174
ENST00000563953 TMEM208-007 protein_coding Homo_sapiens 0 381
ENST00000564087 TMEM208-012 nonsense_mediated_decay Homo_sapiens 0 361
ENST00000565201 TMEM208-011 protein_coding Homo_sapiens 0 401
ENST00000567193 TMEM208-005 retained_intron Homo_sapiens 0 399
ENST00000567752 FHOD1-002 retained_intron Homo_sapiens 3e-19 102
ENST00000568595 FHOD1-005 nonsense_mediated_decay Homo_sapiens 3e-20 102

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