C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000358731 BDP1-016 ENSG00000145734 9606 + 5:71455615-71567820 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000358731
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000358731 0.664±0.00 0.770±0.00 1.918±0.00 2.496±0.56 1.133±0.00 2.772±1.06 1.233±0.02 0.756±0.00 0.723±0.52 2.617±0.00 0.425±0.00 1.486±0.65 0.317±0.15 1.816±0.02

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005737 IDA cytoplasm
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006383 TAS transcription from RNA polymerase III promoter
GO:0010467 TAS gene expression

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000038104 Bdp1-001 protein_coding Mus_musculus 0 1755
ENSMUST00000109379 Bdp1-003 protein_coding Mus_musculus 0 1663
ENSMUST00000167203 Bdp1-005 nonsense_mediated_decay Mus_musculus 0 815
ENSMUST00000163097 Bdp1-004 nonsense_mediated_decay Mus_musculus 0 348
ENSMUST00000099262 Bdp1-002 nonsense_mediated_decay Mus_musculus 0 318

Loading