C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coiled coil domain containing 88A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000109477 Ccdc88a-007 ENSMUSG00000032740 10090 + 11:29373777-29423411 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonLiverOvaryENSMUST00000109477
Transcript ID Adrenal Breast Colon Liver Ovary
ENSMUST00000109477 1.091±0.32 0.789±0.00 0.349±0.14 0.054±0.02 2.365±0.91

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0016477 IEA cell migration
GO:0032956 IEA regulation of actin cytoskeleton organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000263630 CCDC88A-001 protein_coding Homo_sapiens 0 562
ENST00000336838 CCDC88A-002 protein_coding Homo_sapiens 0 562
ENST00000413716 CCDC88A-201 protein_coding Homo_sapiens 0 562
ENST00000430086 CCDC88A-009 protein_coding Homo_sapiens 0 237
ENST00000436346 CCDC88A-202 protein_coding Homo_sapiens 0 562
ENST00000471947 CCDC88A-004 processed_transcript Homo_sapiens 0 326
ENST00000621814 CCDC88A-203 protein_coding Homo_sapiens 0 562

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