C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAS p21 protein activator 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000109552 Rasa1-001 ENSMUSG00000021549 10090 - 13:85214780-85289029 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000109552
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000109552 4.676±1.10 12.298±6.79 7.751±1.37 12.630±2.54 5.460±4.41 2.652±1.27 2.090±0.40 2.344±0.76 2.897±1.22 5.892±1.69 3.378±0.44 7.044±3.73 9.304±2.33 5.580±1.20

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001726 IDA ruffle
GO:0001948 IEA glycoprotein binding
GO:0001953 IEA negative regulation of cell-matrix adhesion
GO:0005099 IBA Ras GTPase activator activity
GO:0005102 IEA receptor binding
GO:0005515 IPI protein binding
GO:0005737 IBA cytoplasm
GO:0005886 IDA plasma membrane
GO:0007162 IEA negative regulation of cell adhesion
GO:0030833 IEA regulation of actin filament polymerization
GO:0031235 IBA intrinsic component of the cytoplasmic side of the plasma membrane
GO:0032320 IBA positive regulation of Ras GTPase activity
GO:0046580 IBA negative regulation of Ras protein signal transduction
GO:0048514 IEA blood vessel morphogenesis
GO:0051020 IEA GTPase binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000274376 RASA1-001 protein_coding Homo_sapiens 0 4364
ENST00000456692 RASA1-002 protein_coding Homo_sapiens 0 4641
ENST00000505587 CCNH-004 retained_intron Homo_sapiens 0 316
ENST00000506290 RASA1-003 protein_coding Homo_sapiens 0 3999
ENST00000509953 RASA1-007 retained_intron Homo_sapiens 0 1133
ENST00000512763 RASA1-004 protein_coding Homo_sapiens 0 3980
ENST00000515800 RASA1-005 nonsense_mediated_decay Homo_sapiens 0 2071

Loading