C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cyclin H
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000505587 CCNH-004 ENSG00000134480 9606 - 5:87391494-87408180 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaENST00000505587
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta
ENST00000505587 4.801±0.00 9.025±0.00 5.955±0.00 6.533±0.00 5.949±0.00 4.268±0.08 3.329±1.06 5.613±0.00 6.413±0.00 7.582±0.00 5.974±0.00 12.797±3.52

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005TN CIL_0005TN_0002 CGP 5:86617904-87391931
CIL_0005TO CIL_0005TO_0002 CGP 5:87267888-87413019

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000163600 Ccnh-003 protein_coding Mus_musculus 0 355
ENSMUST00000022030 Ccnh-001 protein_coding Mus_musculus 0 355
ENSMUST00000109552 Rasa1-001 protein_coding Mus_musculus 0 316
ENSMUST00000119689 Gm12955-001 processed_pseudogene Mus_musculus 0 298
ENSMUST00000164127 Ccnh-002 protein_coding Mus_musculus 0 291
ENSMUST00000163713 Ccnh-006 protein_coding Mus_musculus 0 287
ENSMUST00000166932 Ccnh-007 retained_intron Mus_musculus 2e-33 148
ENSMUST00000172029 Ccnh-004 processed_transcript Mus_musculus 2e-33 148

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