C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAS p21 protein activator (GTPase activating protein) 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000515800 RASA1-005 ENSG00000145715 9606 + 5:87267888-87391919 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverLungOvaryENST00000515800
Transcript ID Liver Lung Ovary
ENST00000515800 2.650±0.00 2.389±0.00 1.977±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005TN CIL_0005TN_0002 CGP 5:86617904-87391931
CIL_0005TO CIL_0005TO_0002 CGP 5:87267888-87413019

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000109552 Rasa1-001 protein_coding Mus_musculus 0 2071
ENSMUST00000148014 Rasa1-006 retained_intron Mus_musculus 0 904
ENSMUST00000152466 Rasa1-003 retained_intron Mus_musculus 0 438
ENSMUST00000146792 Rasa1-007 retained_intron Mus_musculus 0 438
ENSMUST00000149799 Rasa1-005 retained_intron Mus_musculus 0 424
ENSMUST00000142285 Rasa1-009 retained_intron Mus_musculus 0 359
ENSMUST00000153231 Rasa1-002 retained_intron Mus_musculus 0 327
ENSMUST00000141879 Rasa1-004 retained_intron Mus_musculus 0 246

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