C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: dynein light chain roadblock-type 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000109682 Dynlrb1-001 ENSMUSG00000047459 10090 + 2:155236535-155250277 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000109682
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000109682 190.135±60.20 134.208±11.60 223.080±37.00 218.160±121.63 127.465±12.42 103.785±8.26 158.659±3.14 159.623±5.46 116.749±33.16 114.997±3.28 48.733±2.72 110.765±26.60 91.767±57.03 22.482±10.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00098F CIL_00098F_0002 VISTA 2:154750090-155352094
CIL_0005BA CIL_0005BA_0002 CGP 2:155133509-155250277
CIL_0006S0 CIL_0006S0_0003 CGP 2:155236533-155278073

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003774 IEA motor activity
GO:0005515 IPI protein binding
GO:0005737 ISS cytoplasm
GO:0005868 IDA cytoplasmic dynein complex
GO:0005874 IEA microtubule
GO:0006810 IEA transport
GO:0007632 ISS visual behavior
GO:0008152 IEA metabolic process
GO:0042802 IPI identical protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000357156 DYNLRB1-002 protein_coding Homo_sapiens 0 507
ENST00000374846 DYNLRB1-004 protein_coding Homo_sapiens 0 484
ENST00000480759 DYNLRB1-001 processed_transcript Homo_sapiens 0 387

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