C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: dynein, light chain, roadblock-type 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000357156 DYNLRB1-002 ENSG00000125971 9606 + 20:34516409-34540958 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000357156
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000357156 112.346±0.00 139.459±0.00 20.328±0.00 177.736±66.13 74.244±51.05 82.910±65.01 51.789±35.85 82.752±67.48 27.032±9.84 69.790±53.51 59.891±25.47 119.646±46.70 162.757±53.97 67.106±43.42

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00098F CIL_00098F_0001 VISTA 20:33968769-34569610
CIL_0005BA CIL_0005BA_0001 CGP 20:34363235-34540958
CIL_0006S0 CIL_0006S0_0002 CGP 20:34516409-34560345

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003777 NAS microtubule motor activity
GO:0005737 ISS cytoplasm
GO:0005813 IDA centrosome
GO:0005868 ISS cytoplasmic dynein complex
GO:0005874 IEA microtubule
GO:0006810 IEA transport
GO:0007018 NAS microtubule-based movement
GO:0007632 ISS visual behavior
GO:0008152 IEA metabolic process
GO:0016020 IDA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000109682 Dynlrb1-001 protein_coding Mus_musculus 0 507
ENSMUST00000135831 Dynlrb1-004 processed_transcript Mus_musculus 0 484
ENSMUST00000150602 Dynlrb1-003 protein_coding Mus_musculus 0 483
ENSMUST00000054912 Dynlrb1-002 processed_transcript Mus_musculus 0 481

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