C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0006S0_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000021582-ENSDARG00000033609 CGP 7955 11:27537823-27549166
GeneTranscriptPositionBiotype
ENSDARG00000021582 (dynlrb1)
dynein, light chain, roadblock-type 1
ENSDART00000030453 (dynlrb1-001) 27537823-27542194 protein_coding
ENSDARG00000033609 (map1lc3a)
microtubule-associated protein 1 light chain 3 alpha
ENSDART00000042322 (map1lc3a-001) 27542668-27549166 protein_coding
CIL_0006S0_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000125971-ENSG00000101460 CGP 9606 20:34516409-34560345
GeneTranscriptPositionBiotype
ENSG00000101460 (MAP1LC3A)
microtubule-associated protein 1 light chain 3 alpha
ENST00000360668 (MAP1LC3A-002) 34558108-34560345 protein_coding
ENST00000374837 (MAP1LC3A-001) 34546854-34560345 protein_coding
ENST00000397709 (MAP1LC3A-003) 34558718-34560345 protein_coding
ENST00000476428 (MAP1LC3A-004) 34558775-34560345 processed_transcript
ENSG00000206582 (Y_RNA)
Y RNA
ENST00000383855 (Y_RNA.1-585) 34526510-34526606 misc_RNA
CIL_0006S0_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000047459-ENSMUSG00000027602 CGP 10090 2:155236533-155278073
GeneTranscriptPositionBiotype
ENSMUSG00000027602 (Map1lc3a)
microtubule-associated protein 1 light chain 3 alpha
ENSMUST00000029128 (Map1lc3a-001) 155276297-155278073 protein_coding
ENSMUST00000145086 (Map1lc3a-002) 155276543-155278070 processed_transcript
ENSMUST00000154596 (Map1lc3a-003) 155276889-155278068 processed_transcript
ENSMUSG00000047459 (Dynlrb1)
dynein light chain roadblock-type 1
ENSMUST00000054912 (Dynlrb1-002) 155236533-155250272 processed_transcript
ENSMUST00000109682 (Dynlrb1-001) 155236535-155250277 protein_coding
ENSMUST00000135831 (Dynlrb1-004) 155236811-155250080 processed_transcript
ENSMUST00000150602 (Dynlrb1-003) 155236608-155250135 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006S0_0001ENSDARG00000021582ENSDART00000030453ENSDARG00000033609ENSDART00000042322CIL_0006S0_0002ENSG00000101460ENST00000360668ENST00000374837ENST00000397709ENST00000476428ENSG00000206582ENST00000383855CIL_0006S0_0003ENSMUSG00000027602ENSMUST00000029128ENSMUST00000145086ENSMUST00000154596ENSMUSG00000047459ENSMUST00000054912ENSMUST00000109682ENSMUST00000135831ENSMUST00000150602
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006S0_0001ENSDARG00000021582ENSDART00000030453ENSDARG00000033609ENSDART00000042322CIL_0006S0_0002ENSG00000101460ENST00000360668ENST00000397709ENST00000476428ENSG00000206582ENST00000383855CIL_0006S0_0003ENSMUSG00000027602ENSMUST00000029128ENSMUST00000145086ENSMUST00000154596ENSMUSG00000047459ENSMUST00000054912ENSMUST00000109682
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000021582 ENSDART00000030453 N/A N/A N/A 88.301±14.48 N/A N/A 88.185±60.37 114.205±57.90 1.751±0.00 N/A 7.956±0.00 N/A N/A N/A
ENSDARG00000033609 ENSDART00000042322 N/A N/A N/A 60.147±10.67 N/A N/A 195.196±123.47 44.431±17.32 5.928±0.00 N/A 100.372±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000101460 ENST00000360668 N/A N/A N/A 3.794±0.00 0.813±0.00 N/A 0.801±0.00 1.255±0.00 N/A 1.004±0.00 0.620±0.00 8.465±7.13 N/A 20.002±0.00
ENST00000374837 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000397709 14.906±0.00 11.137±0.00 1.386±0.00 27.737±14.30 10.298±9.61 19.976±0.00 19.152±0.00 7.755±6.71 2.190±0.90 21.026±20.54 7.830±4.43 20.198±4.49 12.408±3.04 22.300±6.34
ENST00000476428 23.326±0.00 28.832±0.00 0.614±0.00 48.696±0.00 29.276±0.00 31.626±0.00 16.277±0.00 16.590±0.00 5.566±0.00 41.026±0.00 8.948±0.00 23.123±8.39 10.845±3.72 42.135±0.00
ENSG00000206582 ENST00000383855 N/A 1.201±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027602 ENSMUST00000029128 99.695±23.05 756.340±110.21 42.595±0.81 49.796±28.43 111.793±56.51 114.721±12.82 211.717±74.69 88.400±9.06 21.858±15.21 116.957±32.88 29.855±7.27 148.859±52.52 12.206±6.61 350.583±8.83
ENSMUST00000145086 N/A N/A N/A 41.463±0.00 N/A N/A N/A N/A N/A N/A N/A 29.248±5.47 16.959±1.21 N/A
ENSMUST00000154596 86.118±37.08 229.216±30.13 27.579±6.54 22.030±10.07 42.287±11.00 N/A 168.795±10.46 N/A 3.343±1.06 47.573±6.29 116.424±6.64 69.902±13.84 19.976±9.14 74.340±29.40
ENSMUSG00000047459 ENSMUST00000054912 N/A 42.950±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 30.740±0.00 21.171±0.00 N/A
ENSMUST00000109682 190.135±60.20 134.208±11.60 223.080±37.00 218.160±121.63 127.465±12.42 103.785±8.26 158.659±3.14 159.623±5.46 116.749±33.16 114.997±3.28 48.733±2.72 110.765±26.60 91.767±57.03 22.482±10.11
ENSMUST00000135831 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150602 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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