C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: hnRNP-associated with lethal yellow
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000109701 Raly-002 ENSMUSG00000027593 10090 + 2:154791096-154867245 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000109701
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000109701 33.546±12.12 16.104±4.92 23.034±2.67 22.472±4.15 9.839±1.49 15.502±3.64 27.763±10.27 11.379±0.20 9.314±2.77 27.254±9.46 22.519±0.00 4.865±0.45

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00098F CIL_00098F_0002 VISTA 2:154750090-155352094

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0006397 IEA mRNA processing
GO:0008380 IEA RNA splicing

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000246194 RALY-002 protein_coding Homo_sapiens 0 634
ENST00000333552 RALY-005 protein_coding Homo_sapiens 0 357
ENST00000375114 RALY-001 protein_coding Homo_sapiens 0 1081
ENST00000413297 RALY-003 protein_coding Homo_sapiens 0 370
ENST00000442805 RALY-007 protein_coding Homo_sapiens 0 806
ENST00000448364 RALY-004 protein_coding Homo_sapiens 0 455
ENST00000488227 RALY-009 processed_transcript Homo_sapiens 0 189
ENST00000493399 RALY-006 processed_transcript Homo_sapiens 0 457

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