C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: metastasis associated 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000434050 MTA1-007 ENSG00000182979 9606 + 14:105458344-105470729 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainENST00000434050
Transcript ID Adrenal Brain
ENST00000434050 7.529±0.00 5.333±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004Q6 CIL_0004Q6_0001 CGP 14:105300563-105450106
CIL_0006H9 CIL_0006H9_0001 CGP 14:105398579-105470729
CIL_0006HA CIL_0006HA_0001 CGP 14:105419820-105480170

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008270 IEA zinc ion binding
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000109726 Mta1-201 protein_coding Mus_musculus 0 1967
ENSMUST00000069690 Mta1-003 protein_coding Mus_musculus 0 1967
ENSMUST00000009099 Mta1-001 protein_coding Mus_musculus 0 1967
ENSMUST00000109727 Mta1-202 protein_coding Mus_musculus 0 1500
ENSMUST00000109723 Mta1-002 protein_coding Mus_musculus 0 1500
ENSMUST00000130926 Mta1-004 processed_transcript Mus_musculus 0 1127
ENSMUST00000067826 Mta3-001 protein_coding Mus_musculus 0 424
ENSMUST00000177069 Mta3-003 nonsense_mediated_decay Mus_musculus 0 424
ENSMUST00000112352 Mta3-004 protein_coding Mus_musculus 0 424
ENSMUST00000112350 Mta3-002 protein_coding Mus_musculus 0 424
ENSMUST00000112349 Mta3-005 protein_coding Mus_musculus 0 420
ENSDART00000122665 mta3-004 protein_coding Danio_rerio 0 381
ENSDART00000127454 mta3-001 protein_coding Danio_rerio 0 381
ENSDART00000077180 mta3-002 protein_coding Danio_rerio 0 381
ENSMUST00000176816 Mta3-007 protein_coding Mus_musculus 0 350
ENSMUST00000134488 Mta1-006 processed_transcript Mus_musculus 0 235

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