C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: metastasis associated 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000498644 MTA1-017 ENSG00000182979 9606 + 14:105449240-105460953 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonKidneyLiverMuscleENST00000498644
Transcript ID Bladder Brain Colon Kidney Liver Muscle
ENST00000498644 1.583±0.00 10.637±0.00 20.822±0.00 1.783±0.00 5.209±0.00 6.923±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004Q6 CIL_0004Q6_0001 CGP 14:105300563-105450106
CIL_0006H9 CIL_0006H9_0001 CGP 14:105398579-105470729
CIL_0006HA CIL_0006HA_0001 CGP 14:105419820-105480170

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000109727 Mta1-202 protein_coding Mus_musculus 0 913
ENSMUST00000130926 Mta1-004 processed_transcript Mus_musculus 0 913
ENSMUST00000109723 Mta1-002 protein_coding Mus_musculus 0 913
ENSMUST00000009099 Mta1-001 protein_coding Mus_musculus 0 913
ENSMUST00000109726 Mta1-201 protein_coding Mus_musculus 0 835
ENSMUST00000069690 Mta1-003 protein_coding Mus_musculus 0 835
ENSMUST00000177069 Mta3-003 nonsense_mediated_decay Mus_musculus 0 252
ENSMUST00000112352 Mta3-004 protein_coding Mus_musculus 0 252
ENSMUST00000112349 Mta3-005 protein_coding Mus_musculus 0 252
ENSMUST00000112350 Mta3-002 protein_coding Mus_musculus 0 252
ENSMUST00000067826 Mta3-001 protein_coding Mus_musculus 0 243
ENSMUST00000176816 Mta3-007 protein_coding Mus_musculus 0 220

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