C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000109725 Cbfa2t2-001 ENSMUSG00000038533 10090 + 2:154436481-154539356 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000109725
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000109725 1.793±0.00 4.001±0.69 0.964±0.00 1.796±0.00 1.623±0.60 3.466±0.70 0.872±0.00 1.062±0.32 0.744±0.36 2.951±1.57 0.458±0.25 5.123±1.21 0.863±0.06 1.527±0.50

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006PI CIL_0006PI_0002 CGP 2:154376313-154539356
CIL_00051Z CIL_00051Z_0002 CGP 2:154436481-154558890

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0003714 IDA transcription corepressor activity
GO:0005515 IPI protein binding
GO:0010977 ISS negative regulation of neuron projection development
GO:0030855 IMP epithelial cell differentiation
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0045944 IGI positive regulation of transcription from RNA polymerase II promoter
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000342704 CBFA2T2-009 protein_coding Homo_sapiens 0 2361
ENST00000344201 CBFA2T2-005 protein_coding Homo_sapiens 0 867
ENST00000346541 CBFA2T2-201 protein_coding Homo_sapiens 0 2298
ENST00000359606 CBFA2T2-007 protein_coding Homo_sapiens 0 2298
ENST00000375279 CBFA2T2-003 protein_coding Homo_sapiens 0 2298
ENST00000397800 CBFA2T2-202 protein_coding Homo_sapiens 0 2298
ENST00000471007 CBFA2T2-002 processed_transcript Homo_sapiens 0 593
ENST00000491618 CBFA2T2-006 processed_transcript Homo_sapiens 0 702
ENST00000492345 CBFA2T2-004 protein_coding Homo_sapiens 0 2298
ENST00000543126 CBFA2T2-203 protein_coding Homo_sapiens 0 701

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