C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006PI_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000101400-ENSG00000078699 CGP 9606 20:33407955-33650036
GeneTranscriptPositionBiotype
ENSG00000078699 (CBFA2T2)
core-binding factor, runt domain, alpha subunit 2; translocated to, 2 		ENST00000342704 (CBFA2T2-009) 33490087-33645541 protein_coding
ENST00000344201 (CBFA2T2-005) 33562334-33623954 protein_coding
ENST00000346541 (CBFA2T2-201) 33562365-33650031 protein_coding
ENST00000359606 (CBFA2T2-007) 33600336-33650036 protein_coding
ENST00000375279 (CBFA2T2-003) 33490117-33650036 protein_coding
ENST00000397800 (CBFA2T2-202) 33562365-33650031 protein_coding
ENST00000471007 (CBFA2T2-002) 33490075-33618546 processed_transcript
ENST00000491618 (CBFA2T2-006) 33619565-33636662 processed_transcript
ENST00000492345 (CBFA2T2-004) 33562380-33650036 protein_coding
ENST00000543126 (CBFA2T2-203) 33638739-33646690 protein_coding
ENSG00000101400 (SNTA1)
syntrophin, alpha 1 		ENST00000217381 (SNTA1-001) 33407955-33443892 protein_coding
CIL_0006PI_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027488-ENSMUSG00000038533 CGP 10090 2:154376313-154539356
GeneTranscriptPositionBiotype
ENSMUSG00000038533 (Cbfa2t2)
core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human) 		ENSMUST00000045270 (Cbfa2t2-002) 154436495-154539356 protein_coding
ENSMUST00000099178 (Cbfa2t2-003) 154436484-154526413 protein_coding
ENSMUST00000109724 (Cbfa2t2-004) 154436535-154517824 protein_coding
ENSMUST00000109725 (Cbfa2t2-001) 154436481-154539356 protein_coding
ENSMUST00000135647 (Cbfa2t2-006) 154515962-154518052 retained_intron
ENSMUST00000137526 (Cbfa2t2-007) 154510536-154539356 protein_coding
ENSMUST00000139506 (Cbfa2t2-009) 154531039-154534964 retained_intron
ENSMUST00000154487 (Cbfa2t2-008) 154523984-154531599 retained_intron
ENSMUST00000155202 (Cbfa2t2-005) 154436842-154504777 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006PI_0001ENSG00000078699ENST00000342704ENST00000344201ENST00000346541ENST00000359606ENST00000375279ENST00000397800ENST00000471007ENST00000491618ENST00000492345ENST00000543126ENSG00000101400ENST00000217381CIL_0006PI_0002ENSMUSG00000038533ENSMUST00000045270ENSMUST00000099178ENSMUST00000109724ENSMUST00000109725ENSMUST00000135647ENSMUST00000137526ENSMUST00000139506ENSMUST00000154487ENSMUST00000155202
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006PI_0001ENSG00000078699ENST00000342704ENST00000344201ENST00000346541ENST00000359606ENST00000375279ENST00000397800ENST00000491618ENST00000492345ENSG00000101400ENST00000217381CIL_0006PI_0002ENSMUSG00000038533ENSMUST00000045270ENSMUST00000109724ENSMUST00000109725ENSMUST00000137526ENSMUST00000154487
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000078699 ENST00000342704 N/A N/A N/A N/A 2.474±0.00 1.295±0.00 N/A 0.458±0.00 1.424±0.00 1.675±0.94 0.864±0.10 2.353±0.77 N/A 4.671±2.07
ENST00000344201 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.912±0.00 N/A N/A N/A N/A
ENST00000346541 N/A N/A N/A 1.403±0.00 1.305±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000359606 1.421±0.00 0.789±0.00 0.578±0.00 1.974±0.00 2.033±0.00 N/A 0.998±0.00 0.940±0.58 N/A 1.918±0.00 1.584±0.00 4.826±3.78 1.834±0.55 3.377±0.73
ENST00000375279 N/A N/A N/A N/A N/A N/A N/A N/A 0.766±0.00 N/A 0.458±0.00 N/A 0.254±0.00 N/A
ENST00000397800 N/A 0.475±0.00 N/A 0.843±0.00 0.766±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471007 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491618 N/A N/A 3.382±0.00 4.286±0.00 N/A 4.112±0.00 1.479±0.00 N/A N/A N/A N/A 15.061±8.50 2.767±0.00 22.905±0.00
ENST00000492345 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.891±0.00 N/A N/A
ENST00000543126 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000101400 ENST00000217381 28.385±0.00 18.864±0.00 1.557±0.00 32.246±21.37 18.125±17.51 10.950±9.31 48.669±41.13 7.635±6.81 4.976±0.06 3.224±2.82 84.691±54.68 13.277±11.34 5.158±0.92 20.768±10.37
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000038533 ENSMUST00000045270 4.116±1.41 N/A 4.467±0.57 8.391±3.42 1.854±0.67 3.948±0.00 2.779±0.55 3.416±0.84 1.938±0.64 2.670±0.29 1.821±0.22 3.490±0.65 3.450±1.69 2.724±0.93
ENSMUST00000099178 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000109724 N/A 5.623±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000109725 1.793±0.00 4.001±0.69 0.964±0.00 1.796±0.00 1.623±0.60 3.466±0.70 0.872±0.00 1.062±0.32 0.744±0.36 2.951±1.57 0.458±0.25 5.123±1.21 0.863±0.06 1.527±0.50
ENSMUST00000135647 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137526 1.887±0.43 4.816±1.25 1.952±0.00 3.491±0.60 2.839±0.54 2.631±0.92 0.859±0.00 1.046±0.36 0.825±0.19 1.879±0.37 0.562±0.18 6.533±2.70 1.209±0.01 N/A
ENSMUST00000139506 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154487 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.994±0.00
ENSMUST00000155202 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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