C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 25, member 42
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000110127 Slc25a42-001 ENSMUSG00000002346 10090 - 8:70184340-70212305 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000110127
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000110127 4.816±0.64 5.042±0.00 2.743±1.17 2.256±0.00 6.171±2.30 2.603±1.03 14.368±3.78 18.198±6.57 11.594±4.78 4.721±0.42 9.525±2.24 11.668±3.60 0.915±0.51 1.531±0.74

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006BC CIL_0006BC_0002 CGP 8:70184340-70234466

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005347 ISS ATP transmembrane transporter activity
GO:0005634 IEA nucleus
GO:0005739 IDA mitochondrion
GO:0005743 IDA mitochondrial inner membrane
GO:0008152 IEA metabolic process
GO:0015217 ISS ADP transmembrane transporter activity
GO:0015228 ISS coenzyme A transmembrane transporter activity
GO:0015866 ISS ADP transport
GO:0015867 ISS ATP transport
GO:0016021 IEA integral component of membrane
GO:0035349 ISS coenzyme A transmembrane transport
GO:0043262 ISS adenosine-diphosphatase activity
GO:0080121 ISS AMP transport
GO:0080122 ISS AMP transmembrane transporter activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000318596 SLC25A42-001 protein_coding Homo_sapiens 0 1037
ENST00000594070 SLC25A42-002 retained_intron Homo_sapiens 0 568
ENST00000596819 SLC25A42-005 retained_intron Homo_sapiens 0 326
ENST00000597661 SLC25A42-003 retained_intron Homo_sapiens 0 344
ENST00000600251 SLC25A42-004 retained_intron Homo_sapiens 2.94273e-44 182
ENST00000600275 SLC25A42-006 processed_transcript Homo_sapiens 1.96182e-44 182

Loading