C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: neurexin III
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000110138 Nrxn3-005 ENSMUSG00000066392 10090 + 12:88722888-88850849 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonHeartKidneyLiverLungPlacentaENSMUST00000110138
Transcript ID Bladder Brain Colon Heart Kidney Liver Lung Placenta
ENSMUST00000110138 0.065±0.00 7.252±0.58 0.034±0.01 0.017±0.00 0.052±0.02 0.050±0.05 0.013±0.00 0.245±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004U1 CIL_0004U1_0002 CGP 12:88360554-90334935
CIL_0008FT CIL_0008FT_0002 VISTA 12:88683898-89284926
CIL_0004U0 CIL_0004U0_0002 CGP 12:88722876-90738438

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000554738 NRXN3-002 nonsense_mediated_decay Homo_sapiens 0 1014
ENST00000556088 NRXN3-008 retained_intron Homo_sapiens 0 329

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