C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004U1_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000063761-ENSG00000021645 CGP 9606 14:77800083-79868290
GeneTranscriptPositionBiotype
ENSG00000021645 (NRXN3)
neurexin 3 		ENST00000281127 (NRXN3-005) 79279413-79868290 protein_coding
ENST00000335750 (NRXN3-201) 78614932-78988299 protein_coding
ENST00000428277 (NRXN3-006) 79279906-79864417 protein_coding
ENST00000553363 (NRXN3-010) 78278643-78651311 protein_coding
ENST00000553631 (NRXN3-009) 78403731-78709507 protein_coding
ENST00000553803 (NRXN3-014) 79298795-79573011 processed_transcript
ENST00000554719 (NRXN3-001) 78403750-79862443 protein_coding
ENST00000554738 (NRXN3-002) 78242391-79862033 nonsense_mediated_decay
ENST00000555073 (NRXN3-012) 79280502-79663892 processed_transcript
ENST00000555387 (NRXN3-007) 79280263-79862454 nonsense_mediated_decay
ENST00000556003 (NRXN3-013) 79314051-79861959 processed_transcript
ENST00000556088 (NRXN3-008) 78243602-78645427 retained_intron
ENST00000556496 (NRXN3-003) 78614932-78988299 retained_intron
ENST00000557081 (NRXN3-011) 78698220-78709641 protein_coding
ENST00000557594 (NRXN3-004) 79279339-79862478 protein_coding
ENSG00000063761 (ADCK1)
aarF domain containing kinase 1 		ENST00000238561 (ADCK1-001) 77800083-77933954 protein_coding
ENST00000341211 (ADCK1-002) 77800139-77933952 protein_coding
ENST00000393639 (ADCK1-004) 77800120-77925961 nonsense_mediated_decay
ENST00000555217 (ADCK1-005) 77923232-77935012 retained_intron
ENST00000555333 (ADCK1-008) 77902385-77924575 processed_transcript
ENST00000556048 (ADCK1-006) 77800117-77887249 nonsense_mediated_decay
ENST00000556560 (ADCK1-009) 77908177-77933521 processed_transcript
ENST00000557501 (ADCK1-007) 77800135-77924512 protein_coding
ENSG00000258419 (RP11-588P7.1)
 ENST00000555291 (RP11-588P7.1-001) 79199982-79201632 sense_intronic
ENSG00000258478 (RP11-232C2.1)
 ENST00000553628 (RP11-232C2.1-001) 78744398-78753878 antisense
ENSG00000258637 (RP11-242P2.1)
 ENST00000553322 (RP11-242P2.1-001) 79661666-79791263 antisense
ENSG00000258662 (RP11-588P7.2)
 ENST00000554759 (RP11-588P7.2-001) 79246668-79249023 antisense
ENSG00000258723 (RP11-332E19.2)
 ENST00000554219 (RP11-332E19.2-001) 78279572-78283376 antisense
ENSG00000258829 (CTD-2243E23.1)
 ENST00000553348 (CTD-2243E23.1-002) 79072132-79074762 antisense
ENST00000556145 (CTD-2243E23.1-001) 79072167-79074767 antisense
ENSG00000258874 (RP11-232C2.2)
 ENST00000555680 (RP11-232C2.2-001) 78703615-78709934 antisense
ENSG00000259106 (RP11-242P2.2)
 ENST00000553812 (RP11-242P2.2-001) 79611418-79633311 antisense
CIL_0004U1_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021044-ENSMUSG00000066392 CGP 10090 12:88360554-90334935
GeneTranscriptPositionBiotype
ENSMUSG00000021044 (Adck1)
aarF domain containing kinase 1 		ENSMUST00000101165 (Adck1-201) 88360554-88461719 protein_coding
ENSMUST00000166940 (Adck1-202) 88360801-88461718 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004U1_0001ENSG00000021645ENST00000281127ENST00000335750ENST00000428277ENST00000553363ENST00000553631ENST00000553803ENST00000554719ENST00000554738ENST00000555073ENST00000555387ENST00000556003ENST00000556088ENST00000556496ENST00000557081ENST00000557594ENSG00000063761ENST00000238561ENST00000341211ENST00000393639ENST00000555217ENST00000555333ENST00000556048ENST00000556560ENST00000557501ENSG00000258419ENST00000555291ENSG00000258478ENST00000553628ENSG00000258637ENST00000553322ENSG00000258662ENST00000554759ENSG00000258723ENST00000554219ENSG00000258829ENST00000553348ENST00000556145ENSG00000258874ENST00000555680ENSG00000259106ENST00000553812CIL_0004U1_0002ENSMUSG00000021044ENSMUST00000101165ENSMUST00000166940
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004U1_0001ENSG00000021645ENST00000281127ENST00000428277ENST00000554738ENST00000555387ENST00000557594ENSG00000063761ENST00000238561ENST00000341211ENST00000555217ENST00000555333ENST00000556048ENST00000556560ENST00000557501ENSG00000258419ENST00000555291ENSG00000258478ENST00000553628ENSG00000258637ENST00000553322ENSG00000258662ENST00000554759ENSG00000258723ENST00000554219ENSG00000258829ENST00000553348ENST00000556145ENSG00000258874ENST00000555680ENSG00000259106ENST00000553812CIL_0004U1_0002ENSMUSG00000021044ENSMUST00000101165ENSMUST00000166940
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000021645 ENST00000281127 N/A N/A N/A 1.103±0.00 N/A 0.238±0.00 N/A N/A 0.463±0.00 N/A N/A N/A N/A N/A
ENST00000335750 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000428277 0.227±0.00 0.608±0.00 0.390±0.00 7.681±2.38 0.935±0.63 3.951±3.31 0.112±0.09 0.563±0.00 0.555±0.55 1.275±0.51 0.027±0.02 0.288±0.11 0.514±0.34 1.127±0.00
ENST00000553363 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553631 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553803 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554719 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554738 N/A N/A N/A 3.215±0.28 0.515±0.00 N/A N/A N/A N/A N/A N/A 0.042±0.00 N/A N/A
ENST00000555073 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555387 N/A N/A 0.204±0.00 N/A N/A N/A 0.071±0.00 N/A N/A 1.047±0.00 N/A N/A N/A N/A
ENST00000556003 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556088 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556496 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557081 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557594 N/A N/A N/A N/A 2.010±0.00 2.567±0.69 0.155±0.07 0.302±0.00 1.704±1.69 1.284±0.00 N/A 0.206±0.05 0.572±0.47 N/A
ENSG00000063761 ENST00000238561 0.655±0.00 1.717±0.00 N/A 2.414±1.00 3.019±0.00 0.762±0.00 1.093±0.44 6.085±0.00 1.283±0.00 N/A 0.662±0.00 2.109±1.08 2.861±1.58 2.120±0.00
ENST00000341211 N/A 1.175±0.00 0.205±0.00 N/A N/A N/A N/A 0.393±0.00 0.590±0.37 0.737±0.00 N/A 1.129±0.46 1.711±0.86 1.575±0.00
ENST00000393639 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555217 0.238±0.00 0.834±0.00 0.061±0.00 N/A 0.413±0.03 0.195±0.01 0.225±0.00 N/A 0.300±0.00 0.120±0.02 N/A 0.444±0.02 N/A 0.399±0.12
ENST00000555333 N/A N/A N/A N/A N/A 0.631±0.00 N/A N/A 1.068±0.00 1.002±0.00 N/A N/A N/A N/A
ENST00000556048 0.477±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.584±0.00 N/A N/A N/A 1.369±0.00
ENST00000556560 0.430±0.00 2.875±0.00 0.099±0.00 3.088±0.67 0.911±0.00 0.684±0.11 1.094±0.00 N/A N/A 0.610±0.00 1.616±0.00 2.354±0.57 4.723±0.00 2.809±0.00
ENST00000557501 N/A N/A N/A N/A N/A 0.933±0.00 N/A N/A N/A 0.371±0.00 N/A N/A N/A N/A
ENSG00000258419 ENST00000555291 N/A N/A N/A 0.014±0.00 0.198±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.130±0.09
ENSG00000258478 ENST00000553628 N/A N/A N/A 0.436±0.00 N/A N/A N/A N/A N/A 0.065±0.00 N/A N/A N/A N/A
ENSG00000258637 ENST00000553322 N/A N/A N/A 0.155±0.00 N/A 0.252±0.00 N/A N/A N/A N/A N/A N/A N/A 0.196±0.00
ENSG00000258662 ENST00000554759 N/A N/A N/A 0.073±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.140±0.00
ENSG00000258723 ENST00000554219 N/A 0.061±0.00 N/A N/A N/A N/A N/A N/A N/A 1.645±0.00 N/A N/A N/A N/A
ENSG00000258829 ENST00000553348 N/A N/A N/A 0.102±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556145 N/A N/A 0.112±0.00 0.109±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000258874 ENST00000555680 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 17.117±14.57
ENSG00000259106 ENST00000553812 0.085±0.00 0.578±0.00 N/A 0.416±0.02 0.087±0.00 0.217±0.00 0.176±0.00 0.182±0.05 0.195±0.00 0.781±0.58 0.265±0.00 0.371±0.00 0.180±0.00 0.529±0.13
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021044 ENSMUST00000101165 7.389±0.68 8.898±2.31 5.800±0.59 10.406±3.46 5.018±0.66 3.578±0.52 5.335±0.12 6.679±1.73 3.993±1.58 5.494±0.94 2.411±0.96 9.380±1.43 5.446±3.44 3.784±0.53
ENSMUST00000166940 4.189±0.86 6.902±1.25 2.747±0.05 2.580±0.41 6.247±2.21 3.618±0.67 8.068±0.66 6.030±0.71 3.261±1.88 2.225±0.65 6.761±0.53 3.251±0.86 1.901±0.71 1.101±0.04

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