C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transglutaminase 3, E polypeptide
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000110299 Tgm3-001 ENSMUSG00000027401 10090 + 2:130012349-130050399 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000110299
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000110299 0.041±0.02 0.796±0.31 0.587±0.00 0.381±0.28 0.074±0.05 233.470±24.23 0.030±0.01 0.031±0.02 0.037±0.04 19.651±19.54 0.027±0.02 0.118±0.05 0.025±0.01 0.474±0.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000FR CIL_0000FR_0002 CGP 2:129800517-130050399
CIL_0000FU CIL_0000FU_0002 CGP 2:130012349-130154232

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001533 TAS cornified envelope
GO:0003810 ISS protein-glutamine gamma-glutamyltransferase activity
GO:0003824 ISS catalytic activity
GO:0005509 ISS calcium ion binding
GO:0005737 ISS cytoplasm
GO:0008544 TAS epidermis development
GO:0018149 ISS peptide cross-linking
GO:0030216 ISS keratinocyte differentiation
GO:0031234 ISS extrinsic component of cytoplasmic side of plasma membrane
GO:0031424 IEA keratinization
GO:0035315 TAS hair cell differentiation
GO:0043163 ISS cell envelope organization
GO:0043588 TAS skin development
GO:0051262 ISS protein tetramerization
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000381458 TGM3-001 protein_coding Homo_sapiens 0 1663

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